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CHLRE:IFT46
Contents
| Species (Taxon ID) | Chlamydomonas reinhardtii (Chlamydomonas smithii). (3055) | |
| Gene Name(s) | IFT46 (ECO:0000312 with EMBL:ABH06907.1) (synonyms: FAP32) | |
| Protein Name(s) | Intraflagellar transport protein 46
Flagellar-associated protein 32 IFT complex B protein (ECO:0000312 with EMBL:ABH06907.1) | |
| External Links | ||
| UniProt | A2T2X4 | |
| EMBL | DQ787426 DS496218 | |
| RefSeq | XP_001691140.1 | |
| UniGene | Cre.8330 | |
| STRING | 3055.JGI108954 | |
| PRIDE | A2T2X4 | |
| GeneID | 5716734 | |
| KEGG | cre:CHLREDRAFT_108954 | |
| eggNOG | NOG74258 | |
| InParanoid | A2T2X4 | |
| OMA | QWIASIN | |
| Proteomes | UP000006906 | |
| GO | GO:0005813 GO:0097546 GO:0060170 GO:0005737 GO:0030992 GO:0031514 GO:0008022 GO:0035082 GO:0042384 GO:0044782 GO:0060285 GO:0042073 GO:0050821 GO:0015031 GO:1902017 GO:0031647 | |
| InterPro | IPR022088 | |
| PANTHER | PTHR13376 | |
| Pfam | PF12317 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0042073 |
intraflagellar transport |
ECO:0000314 |
P |
EM with gold labelled IFT46 antibody seen to move along flagella figure 5 and 6 |
complete | |||||
|
involved_in |
GO:0050821 |
protein stabilization |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0060271 |
cilium assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042073 |
intraciliary transport |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042073 |
intraciliary transport |
ECO:0000305 |
curator inference used in manual assertion |
GO:0060271 |
P |
Seeded From UniProt |
complete | ||
|
colocalizes_with |
GO:0036064 |
ciliary basal body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0031514 |
motile cilium |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0031514 |
motile cilium |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0030992 |
intraciliary transport particle B |
ECO:0000305 |
curator inference used in manual assertion |
GO:0031514 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008022 |
protein C-terminus binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0030992 |
intraciliary transport particle B |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042073 |
intraciliary transport |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000332669 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0030992 |
intraciliary transport particle B |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1923818 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005929 |
cilium |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1923818 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005813 |
centrosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1923818 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:1902017 |
regulation of cilium assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0097546 |
ciliary base |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0060285 |
cilium-dependent cell motility |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0060170 |
ciliary membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0044782 |
cilium organization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0035082 |
axoneme assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0031647 |
regulation of protein stability |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0031514 |
motile cilium |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0015031 |
protein transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042073 |
intraciliary transport |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0030992 |
intraciliary transport particle B |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0042995 |
cell projection |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005929 |
cilium |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005856 |
cytoskeleton |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Pedersen, LB et al. (2006) Dissecting the molecular mechanisms of intraflagellar transport in chlamydomonas. Curr. Biol. 16 450-9 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 Lucker, BF et al. (2010) Direct interactions of intraflagellar transport complex B proteins IFT88, IFT52, and IFT46. J. Biol. Chem. 285 21508-18 PubMed GONUTS page
- ↑ Bhogaraju, S et al. (2013) Molecular basis of tubulin transport within the cilium by IFT74 and IFT81. Science 341 1009-12 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 Hou, Y et al. (2007) Functional analysis of an individual IFT protein: IFT46 is required for transport of outer dynein arms into flagella. J. Cell Biol. 176 653-65 PubMed GONUTS page
c
- GO:0042995 ! cell projection
- GO:0005813 ! centrosome
- Chlamydomonadaceae
- Chlamydomonadales
- Chlamydomonas
- Chlamydomonas reinhardtii
- Chlorophyceae
- Chlorophyta
- GO:0036064 ! ciliary basal body
- GO:0097546 ! ciliary base
- GO:0060170 ! ciliary membrane
- GO:0005929 ! cilium
- GO:0060285 ! cilium-dependent cell motility
- GO:0060271 ! cilium assembly
- GO:0044782 ! cilium organization
- GO:0005737 ! cytoplasm
- GO:0005856 ! cytoskeleton
