GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CHICK:VPS29

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) VPS29
Protein Name(s) Vacuolar protein sorting-associated protein 29

Vesicle protein sorting 29

External Links
UniProt Q5ZIL2
EMBL AJ720772
RefSeq NP_001007838.1
UniGene Gga.23170
ProteinModelPortal Q5ZIL2
SMR Q5ZIL2
STRING 9031.ENSGALP00000007202
PaxDb Q5ZIL2
GeneID 416867
KEGG gga:416867
CTD 51699
eggNOG COG0622
HOGENOM HOG000293431
HOVERGEN HBG056165
InParanoid Q5ZIL2
KO K18467
PhylomeDB Q5ZIL2
NextBio 20820263
PRO PR:Q5ZIL2
Proteomes UP000000539
GO GO:0010008
GO:0030904
GO:0046872
GO:0004647
GO:0015031
GO:0042147
Gene3D 3.60.21.10
InterPro IPR024654
IPR029052
IPR000979
IPR028661
PANTHER PTHR11124
PTHR11124:SF12
Pfam PF12850
SUPFAM SSF56300
TIGRFAMs TIGR00040

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0030904

retromer complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9UBQ0

C

Seeded From UniProt

complete

involved_in

GO:1990126

retrograde transport, endosome to plasma membrane

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9UBQ0

P

Seeded From UniProt

complete

involved_in

GO:0032456

endocytic recycling

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9UBQ0

P

Seeded From UniProt

complete

involved_in

GO:0042147

retrograde transport, endosome to Golgi

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000122547
PomBase:SPAC15E1.06
SGD:S000001054

P

Seeded From UniProt

complete

part_of

GO:0030904

retromer complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1928344
PANTHER:PTN000122547
PomBase:SPAC15E1.06
SGD:S000001054
TAIR:locus:2100362
UniProtKB:Q9UBQ0

C

Seeded From UniProt

complete

contributes_to

GO:0008565

protein transporter activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000122547
SGD:S000001054

F

Seeded From UniProt

complete

involved_in

GO:0006886

intracellular protein transport

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000122547
PomBase:SPAC15E1.06

P

Seeded From UniProt

complete

part_of

GO:0005768

endosome

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000122547
PomBase:SPAC15E1.06
SGD:S000001054
UniProtKB:Q9UBQ0

C

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0042147

C

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0042147

C

Seeded From UniProt

complete

part_of

GO:0030904

retromer complex

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR028661

C

Seeded From UniProt

complete

involved_in

GO:0042147

retrograde transport, endosome to Golgi

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR028661

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

part_of

GO:0005768

endosome

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0967

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472
UniProtKB-SubCell:SL-0162

C

Seeded From UniProt

complete

involved_in

GO:0015031

protein transport

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0653

P

Seeded From UniProt

complete

part_of

GO:0010008

endosome membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0100

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page