GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CHICK:TSN12

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) TSPAN12
Protein Name(s) Tetraspanin-12

Tspan-12

External Links
UniProt Q5ZIF5
EMBL AJ720829
RefSeq NP_001007850.1
UniGene Gga.17880
STRING 9031.ENSGALP00000014674
Ensembl ENSGALT00000014690
GeneID 417763
KEGG gga:417763
CTD 23554
eggNOG NOG257008
GeneTree ENSGT00510000047764
HOGENOM HOG000252919
HOVERGEN HBG054253
InParanoid Q5ZIF5
KO K17355
OMA MITLKAR
OrthoDB EOG7SFHX2
PhylomeDB Q5ZIF5
TreeFam TF316345
NextBio 20821015
PRO PR:Q5ZIF5
Proteomes UP000000539
GO GO:0005887
GO:0001525
GO:0007166
GO:0045765
GO:0010842
InterPro IPR000301
IPR018499
IPR018503
IPR008952
Pfam PF00335
PIRSF PIRSF002419
PRINTS PR00259
SUPFAM SSF48652
PROSITE PS00421

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0045765

regulation of angiogenesis

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q8BKT6

P

Seeded From UniProt

complete

NOT|enables

GO:0042813

Wnt-activated receptor activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q8BKT6

F

Seeded From UniProt

complete

involved_in

GO:0010842

retina layer formation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q8BKT6

P

Seeded From UniProt

complete

involved_in

GO:0007166

cell surface receptor signaling pathway

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q8BKT6

P

Seeded From UniProt

complete

part_of

GO:0005887

integral component of plasma membrane

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q8BKT6

C

Seeded From UniProt

complete

involved_in

GO:0007166

cell surface receptor signaling pathway

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1889818
PANTHER:PTN001060286

P

Seeded From UniProt

complete

part_of

GO:0005887

integral component of plasma membrane

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1889818
PANTHER:PTN001060286
UniProtKB:P60033

C

Seeded From UniProt

complete

involved_in

GO:0016055

Wnt signaling pathway

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0042813

P

Seeded From UniProt

complete

involved_in

GO:0045765

regulation of angiogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8BKT6
ensembl:ENSMUSP00000031678

P

Seeded From UniProt

complete

involved_in

GO:0010842

retina layer formation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8BKT6
ensembl:ENSMUSP00000031678

P

Seeded From UniProt

complete

involved_in

GO:0007166

cell surface receptor signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8BKT6
ensembl:ENSMUSP00000031678

P

Seeded From UniProt

complete

part_of

GO:0005887

integral component of plasma membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8BKT6
ensembl:ENSMUSP00000031678

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000301
InterPro:IPR008952
InterPro:IPR018499
InterPro:IPR018503

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003
UniProtKB-SubCell:SL-0039

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

involved_in

GO:0001525

angiogenesis

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0037

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page