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CHICK:TPM1
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | TPM1 | |
| Protein Name(s) | Tropomyosin alpha-1 chain
Alpha-tropomyosin Tropomyosin-1 | |
| External Links | ||
| UniProt | P04268 | |
| EMBL | M32441 X57991 X57993 X57994 X57995 M69144 M69140 M69142 M69143 X16090 X57991 X57993 X57994 X57996 X57991 X57993 X57994 X57996 X57991 X57993 X57994 X57996 M36336 M36337 AY150210 AADN02040437 AADN02040438 J00910 | |
| PIR | S24399 S24400 S24401 S24402 | |
| RefSeq | NP_990732.1 | |
| UniGene | Gga.4108 | |
| PDB | 1IC2 3MTU 3MUD 3U1A 3U1C | |
| PDBsum | 1IC2 3MTU 3MUD 3U1A 3U1C | |
| ProteinModelPortal | P04268 | |
| SMR | P04268 | |
| IntAct | P04268 | |
| PaxDb | P04268 | |
| PRIDE | P04268 | |
| Ensembl | ENSGALT00000039589 | |
| GeneID | 396366 | |
| KEGG | gga:396366 | |
| CTD | 7168 | |
| eggNOG | NOG304012 | |
| GeneTree | ENSGT00550000074494 | |
| HOVERGEN | HBG107404 | |
| InParanoid | P04268 | |
| KO | K10373 | |
| OMA | MRASEDE | |
| OrthoDB | EOG7673C8 | |
| PhylomeDB | P04268 | |
| TreeFam | TF351519 | |
| EvolutionaryTrace | P04268 | |
| NextBio | 20816411 | |
| PRO | PR:P04268 | |
| Proteomes | UP000000539 | |
| ExpressionAtlas | P04268 | |
| GO | GO:0005737 GO:0005856 | |
| InterPro | IPR000533 | |
| Pfam | PF00261 | |
| PRINTS | PR00194 | |
| PROSITE | PS00326 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0008092 |
cytoskeletal protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0015629 |
actin cytoskeleton |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0051015 |
actin filament binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046982 |
protein heterodimerization activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0042803 |
protein homodimerization activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0060048 |
cardiac muscle contraction |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:98809 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0051015 |
actin filament binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003721 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007015 |
actin filament organization |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000443979 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005884 |
actin filament |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000443979 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005856 |
cytoskeleton |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003779 |
actin binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Ogut, O et al. (2003) Interactions between nebulin-like motifs and thin filament regulatory proteins. J. Biol. Chem. 278 3089-97 PubMed GONUTS page
- ↑ Lee, A et al. (2000) Stabilization and remodeling of the membrane skeleton during lens fiber cell differentiation and maturation. Dev. Dyn. 217 257-70 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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