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CHICK:STX6

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) STX6
Protein Name(s) Syntaxin-6
External Links
UniProt Q5ZL19
EMBL AJ719915
RefSeq NP_001006531.1
UniGene Gga.8261
ProteinModelPortal Q5ZL19
SMR Q5ZL19
STRING 9031.ENSGALP00000006160
PaxDb Q5ZL19
Ensembl ENSGALT00000006170
GeneID 424413
KEGG gga:424413
CTD 10228
eggNOG NOG46901
GeneTree ENSGT00390000008991
HOGENOM HOG000237350
HOVERGEN HBG007194
InParanoid Q5ZL19
KO K08498
OMA QVVREMK
PhylomeDB Q5ZL19
NextBio 20826746
PRO PR:Q5ZL19
Proteomes UP000000539
GO GO:0005769
GO:0000139
GO:0016021
GO:0048471
GO:0031201
GO:0032588
GO:0007032
GO:0048193
GO:0006886
GO:0042147
GO:0006906
InterPro IPR015260
IPR006012
IPR010989
IPR000727
Pfam PF05739
PF09177
SMART SM00397
SUPFAM SSF47661
PROSITE PS00914
PS50192

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0048471

perinuclear region of cytoplasm

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:O43752

C

Seeded From UniProt

complete

involved_in

GO:0007032

endosome organization

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9JKK1

P

Seeded From UniProt

complete

involved_in

GO:0006906

vesicle fusion

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:O43752

P

Seeded From UniProt

complete

part_of

GO:0005769

early endosome

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:O43752

C

Seeded From UniProt

complete

involved_in

GO:0048278

vesicle docking

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000461349
SGD:S000005632

P

Seeded From UniProt

complete

involved_in

GO:0042147

retrograde transport, endosome to Golgi

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000272437
UniProtKB:O43752
UniProtKB:O60499

P

Seeded From UniProt

complete

part_of

GO:0031201

SNARE complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0013343
FB:FBgn0035540
MGI:MGI:103077
MGI:MGI:893577
PANTHER:PTN000461349
RGD:61917
RGD:619747
RGD:621005
RGD:621019
RGD:68426
SGD:S000002876
SGD:S000003180
SGD:S000004016
SGD:S000005378
SGD:S000005632
SGD:S000006153
UniProtKB:O14662
UniProtKB:O43752
UniProtKB:P56962
UniProtKB:Q12846
UniProtKB:Q16623
UniProtKB:Q86Y82
dictyBase:DDB_G0275429

C

Seeded From UniProt

complete

part_of

GO:0030285

integral component of synaptic vesicle membrane

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000272438
RGD:61915

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0031106
PANTHER:PTN000461349
RGD:61915
SGD:S000004016

C

Seeded From UniProt

complete

part_of

GO:0012505

endomembrane system

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000461349
TAIR:locus:2025620

C

Seeded From UniProt

complete

part_of

GO:0008021

synaptic vesicle

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000272438
RGD:61915

C

Seeded From UniProt

complete

involved_in

GO:0006906

vesicle fusion

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0013343
MGI:MGI:103077
PANTHER:PTN000461349
RGD:61917
RGD:619747
SGD:S000002876
SGD:S000003180
SGD:S000004016
SGD:S000005378
SGD:S000005632
SGD:S000006153
UniProtKB:O43752
dictyBase:DDB_G0275429
dictyBase:DDB_G0287733

P

Seeded From UniProt

complete

involved_in

GO:0006886

intracellular protein transport

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000461349
UniProtKB:Q946Y7

P

Seeded From UniProt

complete

enables

GO:0005484

SNAP receptor activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0011708
FB:FBgn0013343
FB:FBgn0031106
FB:FBgn0035540
PANTHER:PTN000461349
RGD:619747
RGD:621005
RGD:621019
SGD:S000000012
SGD:S000002876
SGD:S000003180
SGD:S000004016
SGD:S000004795
SGD:S000005378
SGD:S000005562
SGD:S000005632
SGD:S000006153
TAIR:locus:2148960
UniProtKB:O14662
UniProtKB:P56962
UniProtKB:Q13190

F

Seeded From UniProt

complete

enables

GO:0000149

SNARE binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0013343
FB:FBgn0035540
MGI:MGI:109355
MGI:MGI:893577
PANTHER:PTN000461349
RGD:2558
RGD:619747
RGD:621019
RGD:69430
RGD:708499
UniProtKB:O15400
UniProtKB:P56962

F

Seeded From UniProt

complete

involved_in

GO:0090161

Golgi ribbon formation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O43752
ensembl:ENSP00000258301

P

Seeded From UniProt

complete

part_of

GO:0048471

perinuclear region of cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O43752
ensembl:ENSP00000258301

C

Seeded From UniProt

complete

involved_in

GO:0042147

retrograde transport, endosome to Golgi

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O43752
ensembl:ENSP00000258301

P

Seeded From UniProt

complete

involved_in

GO:0032880

regulation of protein localization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O43752
ensembl:ENSP00000258301

P

Seeded From UniProt

complete

involved_in

GO:0032456

endocytic recycling

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O43752
ensembl:ENSP00000258301

P

Seeded From UniProt

complete

part_of

GO:0031201

SNARE complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O43752
ensembl:ENSP00000258301

C

Seeded From UniProt

complete

enables

GO:0019905

syntaxin binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O43752
ensembl:ENSP00000258301

F

Seeded From UniProt

complete

involved_in

GO:0006906

vesicle fusion

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O43752
ensembl:ENSP00000258301

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O43752
ensembl:ENSP00000258301

C

Seeded From UniProt

complete

part_of

GO:0005802

trans-Golgi network

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O43752
ensembl:ENSP00000258301

C

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O43752
ensembl:ENSP00000258301

C

Seeded From UniProt

complete

part_of

GO:0005769

early endosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O43752
ensembl:ENSP00000258301

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O43752
ensembl:ENSP00000258301

C

Seeded From UniProt

complete

involved_in

GO:1903827

regulation of cellular protein localization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9JKK1
ensembl:ENSMUSP00000027743

P

Seeded From UniProt

complete

part_of

GO:0045335

phagocytic vesicle

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9JKK1
ensembl:ENSMUSP00000027743

C

Seeded From UniProt

complete

part_of

GO:0032588

trans-Golgi network membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9JKK1
ensembl:ENSMUSP00000027743

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9JKK1
ensembl:ENSMUSP00000027743

C

Seeded From UniProt

complete

involved_in

GO:0007032

endosome organization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9JKK1
ensembl:ENSMUSP00000027743

P

Seeded From UniProt

complete

part_of

GO:0005802

trans-Golgi network

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9JKK1
ensembl:ENSMUSP00000027743

C

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9JKK1
ensembl:ENSMUSP00000027743

C

Seeded From UniProt

complete

enables

GO:0005484

SNAP receptor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006012

F

Seeded From UniProt

complete

involved_in

GO:0006886

intracellular protein transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006012

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006012
InterPro:IPR010989
InterPro:IPR015260

C

Seeded From UniProt

complete

involved_in

GO:0016192

vesicle-mediated transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010989

P

Seeded From UniProt

complete

involved_in

GO:0048193

Golgi vesicle transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR015260

P

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0333

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

involved_in

GO:0015031

protein transport

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0653

P

Seeded From UniProt

complete

part_of

GO:0000139

Golgi membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0134

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page