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CHICK:SEM3E

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) SEMA3E (synonyms: COLL5)
Protein Name(s) Semaphorin-3E

Collapsin-5 COLL-5

External Links
UniProt O42237
EMBL AF022947
U28243
RefSeq NP_989573.1
UniGene Gga.136
ProteinModelPortal O42237
SMR O42237
STRING 9031.ENSGALP00000013846
PaxDb O42237
GeneID 374089
KEGG gga:374089
CTD 9723
eggNOG NOG324739
HOGENOM HOG000039964
HOVERGEN HBG055071
InParanoid O42237
KO K06840
PhylomeDB O42237
NextBio 20813608
PRO PR:O42237
Proteomes UP000000539
GO GO:0005576
GO:0016020
GO:0004872
GO:0001525
GO:0030154
GO:0007399
Gene3D 2.130.10.10
InterPro IPR016201
IPR001627
IPR027231
IPR015513
IPR015943
PANTHER PTHR11036
PTHR11036:SF22
Pfam PF01403
SMART SM00423
SM00630
SUPFAM SSF101912
SSF103575
PROSITE PS51004

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005615

extracellular space

PMID:9331347[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0038191

neuropilin binding

PMID:9331347[1]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:F1N8P1

F

Seeded From UniProt

complete

enables

GO:0038191

neuropilin binding

PMID:9331347[1]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P79795

F

Seeded From UniProt

complete

involved_in

GO:0071526

semaphorin-plexin signaling pathway

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107556
MGI:MGI:107557
MGI:MGI:107558
MGI:MGI:107560
MGI:MGI:109252
MGI:MGI:1203727
MGI:MGI:1340034
PANTHER:PTN000867340
UniProtKB:Q92854

P

Seeded From UniProt

complete

involved_in

GO:0050919

negative chemotaxis

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107558
MGI:MGI:1096347
PANTHER:PTN000744245

P

Seeded From UniProt

complete

involved_in

GO:0048843

negative regulation of axon extension involved in axon guidance

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107558
MGI:MGI:1096347
PANTHER:PTN000867340
RGD:1308650

P

Seeded From UniProt

complete

enables

GO:0045499

chemorepellent activity

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107558
MGI:MGI:1096347
PANTHER:PTN000867340
UniProtKB:Q13275

F

Seeded From UniProt

complete

enables

GO:0038191

neuropilin binding

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107558
PANTHER:PTN000867406
UniProtKB:A0A1D5PZ68
UniProtKB:O42236
UniProtKB:O42237
UniProtKB:Q90607
UniProtKB:Q90663

F

Seeded From UniProt

complete

involved_in

GO:0030335

positive regulation of cell migration

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:109244
PANTHER:PTN000867340
UniProtKB:Q92854

P

Seeded From UniProt

complete

enables

GO:0030215

semaphorin receptor binding

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107556
MGI:MGI:107557
MGI:MGI:107558
MGI:MGI:109244
MGI:MGI:1202889
MGI:MGI:1203727
MGI:MGI:1338032
MGI:MGI:1340034
MGI:MGI:2387661
PANTHER:PTN000867340
UniProtKB:Q92854
WB:WBGene00003111
WB:WBGene00004889

F

Seeded From UniProt

complete

part_of

GO:0005887

integral component of plasma membrane

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1203727
PANTHER:PTN000112372
UniProtKB:Q92854

C

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107557
MGI:MGI:109244
PANTHER:PTN000744245
UniProtKB:A0A1D5PZ68
UniProtKB:O42236
UniProtKB:O42237
UniProtKB:Q90607
UniProtKB:Q90663

C

Seeded From UniProt

complete

involved_in

GO:0001755

neural crest cell migration

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107557
MGI:MGI:1096347
PANTHER:PTN000867340
ZFIN:ZDB-GENE-050513-4

P

Seeded From UniProt

complete

involved_in

GO:0030154

cell differentiation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0221

P

Seeded From UniProt

complete

involved_in

GO:0001525

angiogenesis

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0037

P

Seeded From UniProt

complete

part_of

GO:0005576

extracellular region

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0964
UniProtKB-SubCell:SL-0243

C

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

involved_in

GO:0007399

nervous system development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0524

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Feiner, L et al. (1997) Secreted chick semaphorins bind recombinant neuropilin with similar affinities but bind different subsets of neurons in situ. Neuron 19 539-45 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page