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CHICK:SEM3D
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | SEMA3D (synonyms: COLL2) | |
| Protein Name(s) | Semaphorin-3D
Collapsin-2 COLL-2 | |
| External Links | ||
| UniProt | Q90663 | |
| EMBL | U28240 | |
| RefSeq | NP_990704.1 | |
| UniGene | Gga.3972 | |
| ProteinModelPortal | Q90663 | |
| SMR | Q90663 | |
| STRING | 9031.ENSGALP00000010582 | |
| PaxDb | Q90663 | |
| PRIDE | Q90663 | |
| Ensembl | ENSGALT00000010596 | |
| GeneID | 396332 | |
| KEGG | gga:396332 | |
| CTD | 223117 | |
| eggNOG | NOG247995 | |
| GeneTree | ENSGT00760000118854 | |
| HOGENOM | HOG000039964 | |
| HOVERGEN | HBG055071 | |
| InParanoid | Q90663 | |
| KO | K06840 | |
| OMA | QNIPRLK | |
| OrthoDB | EOG76QFGN | |
| PhylomeDB | Q90663 | |
| TreeFam | TF316102 | |
| NextBio | 20816380 | |
| PRO | PR:Q90663 | |
| Proteomes | UP000000539 | |
| GO | GO:0005576 GO:0016020 GO:0004872 GO:0030154 GO:0007399 | |
| Gene3D | 2.130.10.10 2.60.40.10 | |
| InterPro | IPR007110 IPR013783 IPR003599 IPR016201 IPR001627 IPR027231 IPR015943 | |
| PANTHER | PTHR11036 | |
| Pfam | PF01403 | |
| SMART | SM00409 SM00423 SM00630 | |
| SUPFAM | SSF101912 SSF103575 | |
| PROSITE | PS50835 PS51004 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0005615 |
extracellular space |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0038191 |
neuropilin binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0038191 |
neuropilin binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0071526 |
semaphorin-plexin signaling pathway |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107556 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0050919 |
negative chemotaxis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107558 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0048843 |
negative regulation of axon extension involved in axon guidance |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107558 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0045499 |
chemorepellent activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107558 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0038191 |
neuropilin binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107558 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0030335 |
positive regulation of cell migration |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:109244 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0030215 |
semaphorin receptor binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107556 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1203727 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005615 |
extracellular space |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107557 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0001755 |
neural crest cell migration |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107557 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007399 |
nervous system development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0030154 |
cell differentiation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Feiner, L et al. (1997) Secreted chick semaphorins bind recombinant neuropilin with similar affinities but bind different subsets of neurons in situ. Neuron 19 539-45 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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