GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
CHICK:SEM3C
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | SEMA3C (synonyms: COLL3) | |
| Protein Name(s) | Semaphorin-3C
Collapsin-3 COLL-3 | |
| External Links | ||
| UniProt | O42236 | |
| EMBL | AF022946 U28241 | |
| RefSeq | NP_989574.1 | |
| UniGene | Gga.43584 | |
| ProteinModelPortal | O42236 | |
| SMR | O42236 | |
| STRING | 9031.ENSGALP00000013762 | |
| PaxDb | O42236 | |
| GeneID | 374090 | |
| KEGG | gga:374090 | |
| CTD | 10512 | |
| eggNOG | NOG247865 | |
| HOGENOM | HOG000039964 | |
| HOVERGEN | HBG055071 | |
| InParanoid | O42236 | |
| KO | K06840 | |
| PhylomeDB | O42236 | |
| NextBio | 20813609 | |
| PRO | PR:O42236 | |
| Proteomes | UP000000539 | |
| GO | GO:0005576 GO:0016020 GO:0004872 GO:0030154 GO:0007399 | |
| Gene3D | 2.130.10.10 2.60.40.10 | |
| InterPro | IPR007110 IPR013783 IPR013098 IPR003599 IPR016201 IPR001627 IPR027231 IPR015943 | |
| PANTHER | PTHR11036 | |
| Pfam | PF07679 PF01403 | |
| SMART | SM00409 SM00423 SM00630 | |
| SUPFAM | SSF101912 SSF103575 | |
| PROSITE | PS50835 PS51004 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0005615 |
extracellular space |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0038191 |
neuropilin binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0038191 |
neuropilin binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0071526 |
semaphorin-plexin signaling pathway |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107556 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0050919 |
negative chemotaxis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107558 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0048843 |
negative regulation of axon extension involved in axon guidance |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107558 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0045499 |
chemorepellent activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107558 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0038191 |
neuropilin binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107558 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0030335 |
positive regulation of cell migration |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:109244 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0030215 |
semaphorin receptor binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107556 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1203727 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005615 |
extracellular space |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107557 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0001755 |
neural crest cell migration |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107557 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0030154 |
cell differentiation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007399 |
nervous system development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Feiner, L et al. (1997) Secreted chick semaphorins bind recombinant neuropilin with similar affinities but bind different subsets of neurons in situ. Neuron 19 539-45 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
c
n
s
