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CHICK:Q5ZLS0

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) CSTF2 (ECO:0000313 with Ensembl:ENSGALP00000010910)
Protein Name(s) Uncharacterized protein (ECO:0000313 with EMBL:CAG31323.1, ECO:0000313 with Ensembl:ENSGALP00000010910)
External Links
UniProt Q5ZLS0
EMBL AADN03004260
AJ719664
RefSeq NP_001006433.1
UniGene Gga.7714
SMR Q5ZLS0
STRING 9031.ENSGALP00000010908
Ensembl ENSGALT00000010924
GeneID 422258
KEGG gga:422258
CTD 1478
eggNOG COG0724
GeneTree ENSGT00760000119351
HOGENOM HOG000214372
HOVERGEN HBG051145
KO K14407
OMA PGPNFNN
OrthoDB EOG7N63NZ
PhylomeDB Q5ZLS0
Reactome REACT_242586
REACT_260474
REACT_262197
NextBio 20824917
Proteomes UP000000539
GO GO:0003676
GO:0000166
Gene3D 3.30.70.330
InterPro IPR025742
IPR026896
IPR012677
IPR000504
Pfam PF14327
PF14304
PF00076
SMART SM00360
PROSITE PS50102

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0098789

pre-mRNA cleavage required for polyadenylation

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000566843
SGD:S000003012

P

Seeded From UniProt

complete

part_of

GO:0005847

mRNA cleavage and polyadenylation specificity factor complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000566843
PomBase:SPBC3B9.11c
UniProtKB:P33240

C

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000566843
SGD:S000003012
TAIR:locus:2013016

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1932622
PANTHER:PTN000566842
UniProtKB:P33240

F

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000504
InterPro:IPR035979

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033105

F

Seeded From UniProt

complete

part_of

GO:0005847

mRNA cleavage and polyadenylation specificity factor complex

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033105

C

Seeded From UniProt

complete

involved_in

GO:0006378

mRNA polyadenylation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033105

P

Seeded From UniProt

complete

involved_in

GO:0031124

mRNA 3'-end processing

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR026896
InterPro:IPR033105

P

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000414619

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page