GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CHICK:Q5ZIM2

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) PLDN (ECO:0000313 with Ensembl:ENSGALP00000009199)
Protein Name(s) Biogenesis of lysosome-related organelles complex 1 subunit 6 (ECO:0000256 with PIRNR:PIRNR037609)

BLOC-1 subunit 6 (ECO:0000256 with PIRNR:PIRNR037609)

External Links
UniProt Q5ZIM2
EMBL AADN03006121
AJ720762
RefSeq NP_001007826.1
UniGene Gga.4717
STRING 9031.ENSGALP00000009199
Ensembl ENSGALT00000009213
GeneID 415447
KEGG gga:415447
CTD 26258
eggNOG NOG87432
GeneTree ENSGT00510000047812
HOGENOM HOG000231944
HOVERGEN HBG049426
OMA EAKHYHS
OrthoDB EOG74TX2D
PhylomeDB Q5ZIM2
TreeFam TF325188
NextBio 20819049
PRO PR:Q5ZIM2
Proteomes UP000000539
GO GO:0031083
GO:0005768
GO:0019898
GO:0031201
GO:0030133
GO:0008089
GO:0048490
GO:0007596
GO:0035646
GO:0030318
GO:0032402
GO:0061025
GO:0031175
GO:0032816
GO:0050942
GO:0033299
InterPro IPR017242
IPR028119
PANTHER PTHR31328
Pfam PF14712
PIRSF PIRSF037609

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0031083

BLOC-1 complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0036192
MGI:MGI:1927580
PANTHER:PTN001583105
UniProtKB:Q9UL45

C

Seeded From UniProt

complete

part_of

GO:0030133

transport vesicle

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001583105
UniProtKB:Q9UL45

C

Seeded From UniProt

complete

part_of

GO:0019898

extrinsic component of membrane

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001583105
UniProtKB:Q9UL45

C

Seeded From UniProt

complete

part_of

GO:1904115

axon cytoplasm

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0048490

C

Seeded From UniProt

complete

involved_in

GO:0061025

membrane fusion

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R0C0
ensembl:ENSMUSP00000005954

P

Seeded From UniProt

complete

involved_in

GO:0048490

anterograde synaptic vesicle transport

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R0C0
ensembl:ENSMUSP00000005954

P

Seeded From UniProt

complete

involved_in

GO:0043473

pigmentation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R0C0
ensembl:ENSMUSP00000005954

P

Seeded From UniProt

complete

involved_in

GO:0033299

secretion of lysosomal enzymes

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R0C0
ensembl:ENSMUSP00000005954

P

Seeded From UniProt

complete

involved_in

GO:0032816

positive regulation of natural killer cell activation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R0C0
ensembl:ENSMUSP00000005954

P

Seeded From UniProt

complete

involved_in

GO:0031175

neuron projection development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R0C0
ensembl:ENSMUSP00000005954

P

Seeded From UniProt

complete

part_of

GO:0031083

BLOC-1 complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R0C0
ensembl:ENSMUSP00000005954

C

Seeded From UniProt

complete

involved_in

GO:0030318

melanocyte differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R0C0
ensembl:ENSMUSP00000005954

P

Seeded From UniProt

complete

involved_in

GO:0008089

anterograde axonal transport

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R0C0
ensembl:ENSMUSP00000005954

P

Seeded From UniProt

complete

involved_in

GO:0007596

blood coagulation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R0C0
ensembl:ENSMUSP00000005954

P

Seeded From UniProt

complete

part_of

GO:0005768

endosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R0C0
ensembl:ENSMUSP00000005954

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page