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CHICK:PCD15

From GONUTS
(Redirected from CHICK:Q0ZM11)
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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) Pcdh15
Protein Name(s) Protocadherin-15
External Links
UniProt Q0ZM14
EMBL DQ354419
DQ354420
DQ354421
DQ354422
DQ354423
DQ354424
DQ354425
DQ354426
DQ354427
DQ354428
DQ354429
AADN03005146
AADN02035256
AADN02035257
AADN02035258
RefSeq NP_001038119.1
UniGene Gga.27533
ProteinModelPortal Q0ZM14
STRING 9031.ENSGALP00000004315
Ensembl ENSGALT00000004324
GeneID 423644
KEGG gga:423644
CTD 65217
GeneTree ENSGT00760000118805
HOGENOM HOG000230919
HOVERGEN HBG053521
KO K16500
OMA VQFPYSA
OrthoDB EOG7ZWD0W
PhylomeDB Q0ZM14
TreeFam TF326779
NextBio 20826087
PRO PR:Q0ZM13
Proteomes UP000000539
ExpressionAtlas Q0ZM14
GO GO:0005737
GO:0016021
GO:0001750
GO:0005886
GO:0032420
GO:0005509
GO:0007015
GO:0007628
GO:0060088
GO:0050973
GO:0050910
GO:0007156
GO:0002009
GO:0035264
GO:0035058
GO:0060013
GO:0001964
GO:0007601
Gene3D 2.60.40.60
InterPro IPR002126
IPR015919
IPR020894
Pfam PF00028
PRINTS PR00205
SMART SM00112
SUPFAM SSF49313
PROSITE PS00232
PS50268

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0098981

cholinergic synapse

PMID:15276155[1]

ECO:0006062

wide-field fluorescence microscopy evidence used in manual assertion

C

part_of:(UBERON:0000010)

Seeded From UniProt

complete

part_of

GO:0098793

presynapse

PMID:15276155[1]

ECO:0006062

wide-field fluorescence microscopy evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0007155

cell adhesion

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1338042
PANTHER:PTN001932250
RGD:620504

P

Seeded From UniProt

complete

part_of

GO:0005887

integral component of plasma membrane

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1298369
MGI:MGI:2136740
MGI:MGI:2157782
PANTHER:PTN001932250

C

Seeded From UniProt

complete

involved_in

GO:1905515

non-motile cilium assembly

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

involved_in

GO:0060122

inner ear receptor cell stereocilium organization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

involved_in

GO:0060088

auditory receptor cell stereocilium organization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

involved_in

GO:0060013

righting reflex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

involved_in

GO:0050973

detection of mechanical stimulus involved in equilibrioception

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

involved_in

GO:0050910

detection of mechanical stimulus involved in sensory perception of sound

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

involved_in

GO:0048839

inner ear development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

involved_in

GO:0042491

inner ear auditory receptor cell differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

involved_in

GO:0035264

multicellular organism growth

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

part_of

GO:0032420

stereocilium

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

C

Seeded From UniProt

complete

involved_in

GO:0007628

adult walking behavior

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

involved_in

GO:0007626

locomotory behavior

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

involved_in

GO:0007605

sensory perception of sound

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

involved_in

GO:0007601

visual perception

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

involved_in

GO:0007015

actin filament organization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

C

Seeded From UniProt

complete

involved_in

GO:0002009

morphogenesis of an epithelium

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

involved_in

GO:0001964

startle response

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

P

Seeded From UniProt

complete

part_of

GO:0001750

photoreceptor outer segment

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99PJ1
ensembl:ENSMUSP00000141792

C

Seeded From UniProt

complete

enables

GO:0005509

calcium ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002126
InterPro:IPR015919

F

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR020894

C

Seeded From UniProt

complete

involved_in

GO:0007155

cell adhesion

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR020894
InterPro:IPR030718

P

Seeded From UniProt

complete

involved_in

GO:0007156

homophilic cell adhesion via plasma membrane adhesion molecules

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002126

P

Seeded From UniProt

complete

involved_in

GO:0007605

sensory perception of sound

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR030718

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002126
InterPro:IPR015919

C

Seeded From UniProt

complete

part_of

GO:0032420

stereocilium

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR030718

C

Seeded From UniProt

complete

involved_in

GO:0048839

inner ear development

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR030718

P

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003
UniProtKB-SubCell:SL-0039

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

involved_in

GO:0007155

cell adhesion

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0130

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Blank, M et al. (2004) Alpha-protocadherins are presynaptic and axonal in nicotinic pathways. Mol. Cell. Neurosci. 26 530-43 PubMed GONUTS page
  2. 2.0 2.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page