GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
CHICK:PDLI7
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | PDLIM7 (synonyms: LMP) | |
| Protein Name(s) | PDZ and LIM domain protein 7
LIM mineralization protein LMP | |
| External Links | ||
| UniProt | Q679P3 | |
| EMBL | AY376690 AJ720300 | |
| RefSeq | NP_001005345.2 | |
| UniGene | Gga.48638 | |
| ProteinModelPortal | Q679P3 | |
| SMR | Q679P3 | |
| IntAct | Q679P3 | |
| GeneID | 416362 | |
| KEGG | gga:416362 | |
| CTD | 9260 | |
| HOVERGEN | HBG051478 | |
| InParanoid | Q679P3 | |
| PhylomeDB | Q679P3 | |
| NextBio | 20819830 | |
| PRO | PR:Q679P3 | |
| Proteomes | UP000000539 | |
| GO | GO:0005856 GO:0030018 GO:0008270 GO:0030154 GO:0007275 GO:0001503 | |
| Gene3D | 2.10.110.10 2.30.42.10 | |
| InterPro | IPR001478 IPR001781 | |
| Pfam | PF00412 PF00595 | |
| SMART | SM00132 SM00228 | |
| SUPFAM | SSF50156 | |
| PROSITE | PS00478 PS50023 PS50106 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0005884 |
actin filament |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0043433 |
negative regulation of DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006913 |
nucleocytoplasmic transport |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0032880 |
regulation of protein localization |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0015629 |
actin cytoskeleton |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0001725 |
stress fiber |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008134 |
transcription factor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008134 |
transcription factor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008134 |
transcription factor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0032880 |
regulation of protein localization |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006913 |
nucleocytoplasmic transport |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0043433 |
negative regulation of DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0001725 |
stress fiber |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0002348) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0002348) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0030864 |
cortical actin cytoskeleton |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0002348) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0031941 |
filamentous actin |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0002348) |
Seeded From UniProt |
complete | ||
|
enables |
GO:0033613 |
activating transcription factor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0033613 |
activating transcription factor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0001503 |
ossification |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005856 |
cytoskeleton |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0030154 |
cell differentiation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0030018 |
Z disc |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Krause, A et al. (2004) Tbx5 and Tbx4 transcription factors interact with a new chicken PDZ-LIM protein in limb and heart development. Dev. Biol. 273 106-20 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Kulisz, A & Simon, HG (2008) An evolutionarily conserved nuclear export signal facilitates cytoplasmic localization of the Tbx5 transcription factor. Mol. Cell. Biol. 28 1553-64 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 3.8 Camarata, T et al. (2006) LMP4 regulates Tbx5 protein subcellular localization and activity. J. Cell Biol. 174 339-48 PubMed GONUTS page
a
c
n
