GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
CHICK:PDE6C
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | PDE6C | |
Protein Name(s) | Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha'
cGMP phosphodiesterase 6C | |
External Links | ||
UniProt | P52731 | |
EMBL | L29233 | |
PIR | I50186 | |
RefSeq | NP_990317.1 | |
UniGene | Gga.492 | |
PDB | 3DBA | |
PDBsum | 3DBA | |
ProteinModelPortal | P52731 | |
SMR | P52731 | |
STRING | 9031.ENSGALP00000010688 | |
PaxDb | P52731 | |
PRIDE | P52731 | |
GeneID | 395834 | |
KEGG | gga:395834 | |
CTD | 5146 | |
eggNOG | NOG290744 | |
HOGENOM | HOG000007069 | |
HOVERGEN | HBG053539 | |
InParanoid | P52731 | |
KO | K13757 | |
PhylomeDB | P52731 | |
EvolutionaryTrace | P52731 | |
NextBio | 20815902 | |
PRO | PR:P52731 | |
Proteomes | UP000000539 | |
GO | GO:0005886 GO:0047555 GO:0030553 GO:0046872 GO:0007165 GO:0007601 | |
Gene3D | 1.10.1300.10 3.30.450.40 | |
InterPro | IPR003018 IPR029016 IPR003607 IPR023088 IPR002073 IPR023174 | |
Pfam | PF01590 PF00233 | |
PRINTS | PR00387 | |
SMART | SM00065 SM00471 | |
SUPFAM | SSF55781 | |
PROSITE | PS00126 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0007601 |
visual perception |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:105956 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0004114 |
3',5'-cyclic-nucleotide phosphodiesterase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007165 |
signal transduction |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008081 |
phosphoric diester hydrolase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0047555 |
3',5'-cyclic-GMP phosphodiesterase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050896 |
response to stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0030553 |
cGMP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007601 |
visual perception |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page