GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
CHICK:CDHR1
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | CDHR1 (synonyms: PCDH21, PRCAD) | |
| Protein Name(s) | Cadherin-related family member 1
Photoreceptor cadherin prCAD Protocadherin-21 | |
| External Links | ||
| UniProt | Q8UVJ7 | |
| EMBL | AF426394 | |
| RefSeq | NP_001001759.1 | |
| UniGene | Gga.97 | |
| ProteinModelPortal | Q8UVJ7 | |
| STRING | 9031.ENSGALP00000003631 | |
| PaxDb | Q8UVJ7 | |
| GeneID | 414847 | |
| KEGG | gga:414847 | |
| CTD | 92211 | |
| eggNOG | NOG286214 | |
| HOGENOM | HOG000082675 | |
| HOVERGEN | HBG101964 | |
| InParanoid | Q8UVJ7 | |
| KO | K16501 | |
| PhylomeDB | Q8UVJ7 | |
| NextBio | 20818743 | |
| PRO | PR:Q8UVJ7 | |
| Proteomes | UP000000539 | |
| GO | GO:0016021 GO:0005886 GO:0005509 GO:0007156 | |
| Gene3D | 2.60.40.60 | |
| InterPro | IPR002126 IPR015919 IPR020894 | |
| Pfam | PF00028 | |
| PRINTS | PR00205 | |
| SMART | SM00112 | |
| SUPFAM | SSF49313 | |
| PROSITE | PS00232 PS50268 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0007155 |
cell adhesion |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1338042 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1298369 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005509 |
calcium ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007155 |
cell adhesion |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007156 |
homophilic cell adhesion via plasma membrane adhesion molecules |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007155 |
cell adhesion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page