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CHICK:CDHR1

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) CDHR1 (synonyms: PCDH21, PRCAD)
Protein Name(s) Cadherin-related family member 1

Photoreceptor cadherin prCAD Protocadherin-21

External Links
UniProt Q8UVJ7
EMBL AF426394
RefSeq NP_001001759.1
UniGene Gga.97
ProteinModelPortal Q8UVJ7
STRING 9031.ENSGALP00000003631
PaxDb Q8UVJ7
GeneID 414847
KEGG gga:414847
CTD 92211
eggNOG NOG286214
HOGENOM HOG000082675
HOVERGEN HBG101964
InParanoid Q8UVJ7
KO K16501
PhylomeDB Q8UVJ7
NextBio 20818743
PRO PR:Q8UVJ7
Proteomes UP000000539
GO GO:0016021
GO:0005886
GO:0005509
GO:0007156
Gene3D 2.60.40.60
InterPro IPR002126
IPR015919
IPR020894
Pfam PF00028
PRINTS PR00205
SMART SM00112
SUPFAM SSF49313
PROSITE PS00232
PS50268

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0007155

cell adhesion

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1338042
PANTHER:PTN001932250
RGD:620504

P

Seeded From UniProt

complete

part_of

GO:0005887

integral component of plasma membrane

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1298369
MGI:MGI:2136740
MGI:MGI:2157782
PANTHER:PTN001932250

C

Seeded From UniProt

complete

enables

GO:0005509

calcium ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002126
InterPro:IPR015919

F

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR020894

C

Seeded From UniProt

complete

involved_in

GO:0007155

cell adhesion

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR020894

P

Seeded From UniProt

complete

involved_in

GO:0007156

homophilic cell adhesion via plasma membrane adhesion molecules

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002126

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002126
InterPro:IPR015919

C

Seeded From UniProt

complete

involved_in

GO:0007155

cell adhesion

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0130

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472
UniProtKB-SubCell:SL-0162

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page