GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
CHICK:OTC
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | OTC | |
| Protein Name(s) | Ornithine carbamoyltransferase, mitochondrial
Ornithine transcarbamylase OTCase | |
| External Links | ||
| UniProt | Q9YHY9 | |
| EMBL | AF065629 AF065638 AF065630 AF065631 AF065632 AF065634 AF065635 AF065636 AF065637 | |
| PIR | JE0309 | |
| RefSeq | NP_990241.1 | |
| UniGene | Gga.434 | |
| ProteinModelPortal | Q9YHY9 | |
| SMR | Q9YHY9 | |
| STRING | 9031.ENSGALP00000026160 | |
| PaxDb | Q9YHY9 | |
| GeneID | 395735 | |
| KEGG | gga:395735 | |
| CTD | 5009 | |
| eggNOG | COG0078 | |
| HOGENOM | HOG000022686 | |
| HOVERGEN | HBG007881 | |
| InParanoid | Q9YHY9 | |
| KO | K00611 | |
| PhylomeDB | Q9YHY9 | |
| Reactome | REACT_115912 | |
| SABIO-RK | Q9YHY9 | |
| UniPathway | UPA00158 | |
| NextBio | 20815803 | |
| PRO | PR:Q9YHY9 | |
| Proteomes | UP000000539 | |
| GO | GO:0005759 GO:0016597 GO:0004585 GO:0042450 GO:0006525 GO:0006520 GO:0044281 GO:0000050 | |
| Gene3D | 3.40.50.1370 | |
| InterPro | IPR006132 IPR006130 IPR006131 IPR002292 | |
| Pfam | PF00185 PF02729 | |
| PRINTS | PR00100 PR00102 | |
| SUPFAM | SSF53671 | |
| TIGRFAMs | TIGR00658 | |
| PROSITE | PS00097 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0042450 |
arginine biosynthetic process via ornithine |
ECO:0000303 |
author statement without traceable support used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004585 |
ornithine carbamoyltransferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042450 |
arginine biosynthetic process via ornithine |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000150424 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0019240 |
citrulline biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000150424 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000150427 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004585 |
ornithine carbamoyltransferase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10067 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006520 |
cellular amino acid metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR006130 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016597 |
amino acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016743 |
carboxyl- or carbamoyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR002292 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004585 |
ornithine carbamoyltransferase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006525 |
arginine metabolic process |
Reactome:R-GGA-187630 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005759 |
mitochondrial matrix |
Reactome:R-GGA-187588 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006526 |
arginine biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000050 |
urea cycle |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniProtKB-KW:KW-0835 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008652 |
cellular amino acid biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005759 |
mitochondrial matrix |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Shimogiri, T et al. (1998) Chicken ornithine transcarbamylase gene, structure, regulation, and chromosomal assignment: repetitive sequence motif in intron 3 regulates this enzyme activity. J. Biochem. 124 962-71 PubMed GONUTS page
- ↑ Tsuji, S (1983) Chicken ornithine transcarbamylase: purification and some properties. J. Biochem. 94 1307-15 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
a
c
l
