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CHICK:OPSR
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | No Information Provided. | |
| Protein Name(s) | Red-sensitive opsin
Iodopsin Red cone photoreceptor pigment | |
| External Links | ||
| UniProt | P22329 | |
| EMBL | M62903 X57490 | |
| PIR | A37783 | |
| RefSeq | NP_990771.1 | |
| UniGene | Gga.716 | |
| ProteinModelPortal | P22329 | |
| GeneID | 396421 | |
| KEGG | gga:396421 | |
| CTD | 5956 | |
| HOVERGEN | HBG107442 | |
| KO | K04251 | |
| PhylomeDB | P22329 | |
| NextBio | 20816462 | |
| Proteomes | UP000000539 | |
| GO | GO:0016021 GO:0004930 GO:0009881 GO:0007602 GO:0018298 GO:0007601 | |
| InterPro | IPR000276 IPR017452 IPR001760 IPR000378 IPR027430 | |
| Pfam | PF00001 | |
| PRINTS | PR00237 PR00238 PR00575 | |
| PROSITE | PS00237 PS50262 PS00238 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0070207 |
protein homotrimerization |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0042803 |
protein homodimerization activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016037 |
light absorption |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005623 |
cell |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0000966) |
Seeded From UniProt |
complete | ||
|
enables |
GO:0031404 |
chloride ion binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016038 |
absorption of visible light |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0031982 |
vesicle |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000573) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0060342 |
photoreceptor inner segment membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000573) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005623 |
cell |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
|
part_of |
GO:0044297 |
cell body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0009004) |
Seeded From UniProt |
complete | ||
|
colocalizes_with |
GO:0005794 |
Golgi apparatus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000573) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0001750 |
photoreceptor outer segment |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000573) |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0016039 |
absorption of UV light |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0018298 |
protein-chromophore linkage |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
has_participant:(CHEBI:16066) |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0016037 |
light absorption |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005623 |
cell |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0000966) |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0071482 |
cellular response to light stimulus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0002940 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008020 |
G protein-coupled photoreceptor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0002940 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007602 |
phototransduction |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0002940 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007186 |
G protein-coupled receptor signaling pathway |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000662115 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1929473 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0001750 |
photoreceptor outer segment |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1097692 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009584 |
detection of visible light |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0008020 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004930 |
G protein-coupled receptor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007186 |
G protein-coupled receptor signaling pathway |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007601 |
visual perception |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007602 |
phototransduction |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000276 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007601 |
visual perception |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007602 |
phototransduction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0018298 |
protein-chromophore linkage |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0009881 |
photoreceptor activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007165 |
signal transduction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007186 |
G protein-coupled receptor signaling pathway |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004930 |
G protein-coupled receptor activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0050896 |
response to stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Okano, T et al. (1989) Purification of cone visual pigments from chicken retina. Biochemistry 28 8848-56 PubMed GONUTS page
- ↑ 2.0 2.1 Okada, T et al. (1994) Circular dichroism of metaiodopsin II and its binding to transducin: a comparative study between meta II intermediates of iodopsin and rhodopsin. Biochemistry 33 4940-6 PubMed GONUTS page
- ↑ 3.0 3.1 Fukada, Y & Yoshizawa, T (1982) Activation of phosphodiesterase by chicken iodopsin. FEBS Lett. 149 117-22 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 4.5 Araki, M et al. (1990) Localization of iodopsin in the chick retina during in vivo and in vitro cone differentiation. Invest. Ophthalmol. Vis. Sci. 31 1466-73 PubMed GONUTS page
- ↑ Yokoyama, S & Radlwimmer, FB (2001) The molecular genetics and evolution of red and green color vision in vertebrates. Genetics 158 1697-710 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 Shichida, Y et al. (1994) Is chicken green-sensitive cone visual pigment a rhodopsin-like pigment? A comparative study of the molecular properties between chicken green and rhodopsin. Biochemistry 33 9040-4 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 7.3 7.4 7.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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