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CHICK:OPSG
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | PRA1 | |
| Protein Name(s) | Green-sensitive opsin
Green cone photoreceptor pigment | |
| External Links | ||
| UniProt | P28683 | |
| EMBL | M92038 M88178 | |
| PIR | A42347 | |
| RefSeq | NP_990821.1 | |
| UniGene | Gga.852 | |
| ProteinModelPortal | P28683 | |
| SMR | P28683 | |
| BioGrid | 676733 | |
| STRING | 9031.ENSGALP00000004483 | |
| PaxDb | P28683 | |
| Ensembl | ENSGALT00000004492 | |
| GeneID | 396486 | |
| KEGG | gga:396486 | |
| CTD | 6010 | |
| eggNOG | NOG311294 | |
| GeneTree | ENSGT00760000118977 | |
| HOGENOM | HOG000253932 | |
| HOVERGEN | HBG107442 | |
| InParanoid | P28683 | |
| KO | K04250 | |
| OMA | MGNFRFS | |
| OrthoDB | EOG72NRQJ | |
| PhylomeDB | P28683 | |
| TreeFam | TF324998 | |
| Reactome | REACT_198054 REACT_198055 REACT_247191 REACT_253620 | |
| NextBio | 20816525 | |
| Proteomes | UP000000539 | |
| ExpressionAtlas | P28683 | |
| GO | GO:0016021 GO:0004930 GO:0009881 GO:0007602 GO:0018298 GO:0007601 | |
| Gene3D | 4.10.840.10 | |
| InterPro | IPR000276 IPR017452 IPR001760 IPR027430 IPR000732 IPR019477 | |
| Pfam | PF00001 PF10413 | |
| PRINTS | PR00237 PR00238 PR00579 | |
| PROSITE | PS00237 PS50262 PS00238 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0016038 |
absorption of visible light |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0018298 |
protein-chromophore linkage |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
has_participant:(CHEBI:16066) |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0016037 |
light absorption |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005623 |
cell |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0000966) |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0071482 |
cellular response to light stimulus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0002940 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008020 |
G protein-coupled photoreceptor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0002940 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007602 |
phototransduction |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0002940 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007186 |
G protein-coupled receptor signaling pathway |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000662115 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1929473 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0001750 |
photoreceptor outer segment |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1097692 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009584 |
detection of visible light |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0008020 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004930 |
G protein-coupled receptor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007186 |
G protein-coupled receptor signaling pathway |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007601 |
visual perception |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007602 |
phototransduction |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000276 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0009881 |
photoreceptor activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007165 |
signal transduction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0050896 |
response to stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007186 |
G protein-coupled receptor signaling pathway |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007602 |
phototransduction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004930 |
G protein-coupled receptor activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007601 |
visual perception |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0018298 |
protein-chromophore linkage |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Sato, K et al. (2012) Comparative studies on the late bleaching processes of four kinds of cone visual pigments and rod visual pigment. Biochemistry 51 4300-8 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Shichida, Y et al. (1994) Is chicken green-sensitive cone visual pigment a rhodopsin-like pigment? A comparative study of the molecular properties between chicken green and rhodopsin. Biochemistry 33 9040-4 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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