CHICK:OPSD

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	RHO
Protein Name(s)	Rhodopsin
External Links
UniProt	P22328
EMBL	D00702
PIR	S29152
RefSeq	NP_001025777.1
UniGene	Gga.54135
ProteinModelPortal	P22328
SMR	P22328
GeneID	751791
KEGG	gga:751791
HOVERGEN	HBG107442
InParanoid	P22328
KO	K04250
PhylomeDB	P22328
NextBio	20917913
PRO	PR:P22328
Proteomes	UP000000539
GO	GO:0016021 GO:0004930 GO:0009881 GO:0007602 GO:0018298 GO:0007601
Gene3D	4.10.840.10
InterPro	IPR000276 IPR017452 IPR001760 IPR027430 IPR000732 IPR019477
Pfam	PF00001 PF10413
PRINTS	PR00237 PR00238 PR00579
PROSITE	PS00237 PS50262 PS00238

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
part_of	GO:0016021	integral component of membrane	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P02699	C		Seeded From UniProt	complete
enables	GO:0008020	G protein-coupled photoreceptor activity	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P02699	F		Seeded From UniProt	complete
enables	GO:0005502	11-cis retinal binding	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P02699	F		Seeded From UniProt	complete
involved_in	GO:0016056	rhodopsin mediated signaling pathway	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P02699	P		Seeded From UniProt	complete
involved_in	GO:0016038	absorption of visible light	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P02699	P		Seeded From UniProt	complete
part_of	GO:0097381	photoreceptor disc membrane	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P08100	C		Seeded From UniProt	complete
involved_in	GO:0070207	protein homotrimerization	PMID:2605226^[1]	ECO:0000314	direct assay evidence used in manual assertion		P		Seeded From UniProt	complete
enables	GO:0042803	protein homodimerization activity	PMID:2605226^[1]	ECO:0000314	direct assay evidence used in manual assertion		F		Seeded From UniProt	complete
enables	GO:0001965	G-protein alpha-subunit binding	PMID:12196552^[2]	ECO:0000353	physical interaction evidence used in manual assertion	UniProtKB:Q5F3B5	F	occurs_in:(UBERON:0000966)\|occurs_in:(UBERON:0000966)	Seeded From UniProt	complete
enables	GO:0001965	G-protein alpha-subunit binding	PMID:12196552^[2]	ECO:0000353	physical interaction evidence used in manual assertion	UniProtKB:Q71RI7	F	occurs_in:(UBERON:0000966)\|occurs_in:(UBERON:0000966)	Seeded From UniProt	complete
enables	GO:0001965	G-protein alpha-subunit binding	PMID:12196552^[2]	ECO:0000353	physical interaction evidence used in manual assertion	UniProtKB:Q9DG28	F	occurs_in:(UBERON:0000966)\|occurs_in:(UBERON:0000966)	Seeded From UniProt	complete
part_of	GO:0001750	photoreceptor outer segment	PMID:12196552^[2]	ECO:0000314	direct assay evidence used in manual assertion		C	part_of:(UBERON:0000966)	Seeded From UniProt	complete
involved_in	GO:0018298	protein-chromophore linkage	PMID:8049204^[3]	ECO:0000314	direct assay evidence used in manual assertion		P	has_participant:(CHEBI:16066)	Seeded From UniProt	complete
involved_in	GO:0016037	light absorption	PMID:8049204^[3]	ECO:0000314	direct assay evidence used in manual assertion		P		Seeded From UniProt	complete
part_of	GO:0005623	cell	PMID:8049204^[3]	ECO:0000314	direct assay evidence used in manual assertion		C	part_of:(UBERON:0000966)	Seeded From UniProt	complete
involved_in	GO:0071482	cellular response to light stimulus	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0002940 MGI:MGI:97914 PANTHER:PTN000662115 UniProtKB:D0E2W5 UniProtKB:F1NEY8	P		Seeded From UniProt	complete
enables	GO:0008020	G protein-coupled photoreceptor activity	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0002940 FB:FBgn0003249 FB:FBgn0003250 FB:FBgn0014019 FB:FBgn0019940 MGI:MGI:1353425 PANTHER:PTN000662115 RGD:621701 UniProtKB:D0E2W5 UniProtKB:F1NEY2 UniProtKB:F1NEY8 UniProtKB:P02699 UniProtKB:Q9UHM6	F		Seeded From UniProt	complete
involved_in	GO:0007602	phototransduction	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0002940 FB:FBgn0014019 FB:FBgn0019940 MGI:MGI:1353425 MGI:MGI:97914 PANTHER:PTN000662115 RGD:621701 UniProtKB:F1RAF0 UniProtKB:Q9UHM6 ZFIN:ZDB-GENE-040724-51 ZFIN:ZDB-GENE-061201-30 ZFIN:ZDB-GENE-081105-91	P		Seeded From UniProt	complete
involved_in	GO:0007186	G protein-coupled receptor signaling pathway	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000662115 UniProtKB:P08100 ZFIN:ZDB-GENE-070111-2 ZFIN:ZDB-GENE-080415-3 ZFIN:ZDB-GENE-110622-1	P		Seeded From UniProt	complete
part_of	GO:0005887	integral component of plasma membrane	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1929473 PANTHER:PTN000662115 UniProtKB:P02699	C		Seeded From UniProt	complete
part_of	GO:0001750	photoreceptor outer segment	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1097692 MGI:MGI:97914 MGI:MGI:99438 PANTHER:PTN000662150 RGD:3573 RGD:620978 RGD:621033 UniProtKB:F1P3Y2 UniProtKB:P08100 UniProtKB:P22328 UniProtKB:P22329 ZFIN:ZDB-GENE-990604-42	C		Seeded From UniProt	complete
enables	GO:0004930	G protein-coupled receptor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000276	F		Seeded From UniProt	complete
involved_in	GO:0007186	G protein-coupled receptor signaling pathway	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760	P		Seeded From UniProt	complete
involved_in	GO:0007601	visual perception	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR001760	P		Seeded From UniProt	complete
involved_in	GO:0007602	phototransduction	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000732	P		Seeded From UniProt	complete
part_of	GO:0016021	integral component of membrane	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760 InterPro:IPR017452	C		Seeded From UniProt	complete
part_of	GO:0042995	cell projection	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0966	C		Seeded From UniProt	complete
involved_in	GO:0007601	visual perception	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0844	P		Seeded From UniProt	complete
involved_in	GO:0007186	G protein-coupled receptor signaling pathway	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0297	P		Seeded From UniProt	complete
involved_in	GO:0050896	response to stimulus	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0716	P		Seeded From UniProt	complete
enables	GO:0009881	photoreceptor activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0600	F		Seeded From UniProt	complete
involved_in	GO:0007602	phototransduction	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0681	P		Seeded From UniProt	complete
enables	GO:0004930	G protein-coupled receptor activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0297	F		Seeded From UniProt	complete
involved_in	GO:0007165	signal transduction	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0807	P		Seeded From UniProt	complete
part_of	GO:0016021	integral component of membrane	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0812	C		Seeded From UniProt	complete
involved_in	GO:0018298	protein-chromophore linkage	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0157	P		Seeded From UniProt	complete
part_of	GO:0016020	membrane	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0472 UniProtKB-SubCell:SL-0162	C		Seeded From UniProt	complete
part_of	GO:0001750	photoreceptor outer segment	GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-SubCell:SL-0458	C		Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 Okano, T et al. (1989) Purification of cone visual pigments from chicken retina. Biochemistry 28 8848-56 PubMed GONUTS page
↑ ^2.0 ^2.1 ^2.2 ^2.3 Kasahara, T et al. (2002) Opsin-G11-mediated signaling pathway for photic entrainment of the chicken pineal circadian clock. J. Neurosci. 22 7321-5 PubMed GONUTS page
↑ ^3.0 ^3.1 ^3.2 Shichida, Y et al. (1994) Is chicken green-sensitive cone visual pigment a rhodopsin-like pigment? A comparative study of the molecular properties between chicken green and rhodopsin. Biochemistry 33 9040-4 PubMed GONUTS page
↑ ^4.0 ^4.1 ^4.2 ^4.3 ^4.4 ^4.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:2605226-1] 1.0 ^1.1 Okano, T et al. (1989) Purification of cone visual pigments from chicken retina. Biochemistry 28 8848-56 PubMed GONUTS page

[PMID:12196552-2] 2.0 ^2.1 ^2.2 ^2.3 Kasahara, T et al. (2002) Opsin-G11-mediated signaling pathway for photic entrainment of the chicken pineal circadian clock. J. Neurosci. 22 7321-5 PubMed GONUTS page

[PMID:8049204-3] 3.0 ^3.1 ^3.2 Shichida, Y et al. (1994) Is chicken green-sensitive cone visual pigment a rhodopsin-like pigment? A comparative study of the molecular properties between chicken green and rhodopsin. Biochemistry 33 9040-4 PubMed GONUTS page

[PMID:21873635-4] 4.0 ^4.1 ^4.2 ^4.3 ^4.4 ^4.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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CHICK:OPSD

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