GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
CHICK:MTU1
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | TRMU (synonyms: MTU1) | |
Protein Name(s) | Mitochondrial tRNA-specific 2-thiouridylase 1 | |
External Links | ||
UniProt | Q5ZKW0 | |
EMBL | AJ719974 | |
RefSeq | NP_001026522.1 | |
UniGene | Gga.48137 | |
ProteinModelPortal | Q5ZKW0 | |
STRING | 9031.ENSGALP00000006683 | |
PaxDb | Q5ZKW0 | |
GeneID | 425909 | |
KEGG | gga:425909 | |
CTD | 55687 | |
eggNOG | COG0482 | |
HOGENOM | HOG000218046 | |
HOVERGEN | HBG108157 | |
InParanoid | Q5ZKW0 | |
KO | K00566 | |
OrthoDB | EOG7GBFWT | |
PhylomeDB | Q5ZKW0 | |
TreeFam | TF105611 | |
NextBio | 20827708 | |
PRO | PR:Q5ZKW0 | |
Proteomes | UP000000539 | |
GO | GO:0005739 GO:0005524 GO:0016783 GO:0000049 GO:0008033 | |
Gene3D | 2.30.30.280 3.40.50.620 | |
HAMAP | MF_00144 | |
InterPro | IPR023382 IPR014729 IPR004506 | |
PANTHER | PTHR11933 | |
Pfam | PF03054 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1919276 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0002143 |
tRNA wobble position uridine thiolation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11344 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005739 |
mitochondrion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75648 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75648 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005739 |
mitochondrion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9DAT5 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0008033 |
tRNA processing |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016783 |
sulfurtransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000049 |
tRNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005739 |
mitochondrion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008033 |
tRNA processing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page