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CHICK:LUM
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | LUM (synonyms: LDC) | |
Protein Name(s) | Lumican
Keratan sulfate proteoglycan lumican KSPG lumican | |
External Links | ||
UniProt | P51890 | |
EMBL | M80584 | |
PIR | A41748 | |
RefSeq | NP_001263286.1 | |
UniGene | Gga.4078 | |
ProteinModelPortal | P51890 | |
STRING | 9031.ENSGALP00000018370 | |
PaxDb | P51890 | |
PRIDE | P51890 | |
Ensembl | ENSGALT00000018392 | |
GeneID | 417891 | |
KEGG | gga:417891 | |
CTD | 4060 | |
eggNOG | COG4886 | |
GeneTree | ENSGT00760000118969 | |
HOGENOM | HOG000234447 | |
HOVERGEN | HBG108061 | |
InParanoid | P51890 | |
KO | K08122 | |
OMA | KKLHINY | |
OrthoDB | EOG75F4DF | |
PhylomeDB | P51890 | |
TreeFam | TF334562 | |
Reactome | REACT_197560 REACT_198183 REACT_262058 REACT_269430 REACT_269766 | |
NextBio | 20821127 | |
PRO | PR:P51890 | |
Proteomes | UP000000539 | |
GO | GO:0005615 GO:0070062 GO:0005583 GO:0030199 GO:0045944 GO:0007601 | |
InterPro | IPR001611 IPR003591 IPR000372 IPR027219 | |
PANTHER | PTHR24371:SF54 | |
Pfam | PF00560 PF13855 PF01462 | |
SMART | SM00369 SM00013 | |
PROSITE | PS51450 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
enables |
GO:0005518 |
collagen binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000689695 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005583 |
fibrillar collagen trimer |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P51884 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0005518 |
collagen binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P51884 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P51885 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032914 |
positive regulation of transforming growth factor beta1 production |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P51885 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0031012 |
extracellular matrix |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P51885 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007601 |
visual perception |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030199 |
collagen fibril organization |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0062023 |
collagen-containing extracellular matrix |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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