GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CHICK:LIN7C

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) LIN7C
Protein Name(s) Protein lin-7 homolog C

Lin-7C

External Links
UniProt Q5F425
EMBL AJ851475
RefSeq NP_001026238.1
UniGene Gga.4601
ProteinModelPortal Q5F425
SMR Q5F425
BioGrid 682402
IntAct Q5F425
STRING 9031.ENSGALP00000039371
PaxDb Q5F425
Ensembl ENSGALT00000040172
GeneID 421608
KEGG gga:421608
CTD 64130
eggNOG NOG320117
GeneTree ENSGT00550000074582
HOGENOM HOG000285929
HOVERGEN HBG052329
InParanoid Q5F425
OMA RRQQNNF
OrthoDB EOG75MVXG
PhylomeDB Q5F425
TreeFam TF316850
NextBio 20824350
PRO PR:Q5F425
Proteomes UP000000539
GO GO:0005911
GO:0005737
GO:0070062
GO:0097025
GO:0045202
GO:0006887
GO:0002011
GO:0007269
GO:0015031
Gene3D 2.30.42.10
InterPro IPR004172
IPR014775
IPR017365
IPR001478
Pfam PF02828
PF00595
PIRSF PIRSF038039
SMART SM00569
SM00228
SUPFAM SSF50156
PROSITE PS51022
PS50106

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:1903361

protein localization to basolateral plasma membrane

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001019267
WB:WBGene00002996

P

Seeded From UniProt

complete

part_of

GO:0097025

MPP7-DLG1-LIN7 complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000362480
UniProtKB:Q9NUP9

C

Seeded From UniProt

complete

enables

GO:0097016

L27 domain binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000362480
UniProtKB:O14910
UniProtKB:Q9NUP9

F

Seeded From UniProt

complete

part_of

GO:0045202

synapse

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1330839
PANTHER:PTN001019267
RGD:620730
RGD:621164
RGD:621256

C

Seeded From UniProt

complete

involved_in

GO:0045199

maintenance of epithelial cell apical/basal polarity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001019267
ZFIN:ZDB-GENE-041011-2

P

Seeded From UniProt

complete

part_of

GO:0016323

basolateral plasma membrane

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:2135609
PANTHER:PTN001019267
RGD:621256
UniProtKB:Q5EBL8

C

Seeded From UniProt

complete

involved_in

GO:0007269

neurotransmitter secretion

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1330839
MGI:MGI:1330858
MGI:MGI:2135609
PANTHER:PTN001019267

P

Seeded From UniProt

complete

part_of

GO:0005911

cell-cell junction

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001019267
RGD:620730
RGD:621164
UniProtKB:Q9NUP9
WB:WBGene00002996

C

Seeded From UniProt

complete

part_of

GO:0098793

presynapse

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0007269

C

Seeded From UniProt

complete

part_of

GO:0098793

presynapse

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0007269

C

Seeded From UniProt

complete

part_of

GO:0045202

synapse

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O88952
ensembl:ENSMUSP00000028583

C

Seeded From UniProt

complete

involved_in

GO:0007269

neurotransmitter secretion

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O88952
ensembl:ENSMUSP00000028583

P

Seeded From UniProt

complete

part_of

GO:0097025

MPP7-DLG1-LIN7 complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9NUP9
ensembl:ENSP00000278193

C

Seeded From UniProt

complete

enables

GO:0097016

L27 domain binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9NUP9
ensembl:ENSP00000278193

F

Seeded From UniProt

complete

enables

GO:0019904

protein domain specific binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9NUP9
ensembl:ENSP00000278193

F

Seeded From UniProt

complete

enables

GO:0008092

cytoskeletal protein binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9NUP9
ensembl:ENSP00000278193

F

Seeded From UniProt

complete

part_of

GO:0005911

cell-cell junction

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9NUP9
ensembl:ENSP00000278193

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9NUP9
ensembl:ENSP00000278193

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9NUP9
ensembl:ENSP00000278193

C

Seeded From UniProt

complete

involved_in

GO:0002011

morphogenesis of an epithelial sheet

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9NUP9
ensembl:ENSP00000278193

P

Seeded From UniProt

complete

involved_in

GO:0006887

exocytosis

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0268

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003
UniProtKB-SubCell:SL-0039

C

Seeded From UniProt

complete

involved_in

GO:0015031

protein transport

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0653

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

part_of

GO:0030054

cell junction

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0965
UniProtKB-SubCell:SL-0038

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page