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CHICK:EDC3

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) EDC3 (synonyms: YJDC)
Protein Name(s) Enhancer of mRNA-decapping protein 3

YjeF domain-containing protein 1

External Links
UniProt Q5ZLS2
EMBL AJ719662
RefSeq NP_001025556.1
UniGene Gga.1119
ProteinModelPortal Q5ZLS2
SMR Q5ZLS2
STRING 9031.ENSGALP00000002041
PaxDb Q5ZLS2
GeneID 415294
KEGG gga:415294
CTD 80153
eggNOG NOG271303
HOGENOM HOG000231481
HOVERGEN HBG079428
InParanoid Q5ZLS2
KO K12615
PhylomeDB Q5ZLS2
NextBio 20818921
PRO PR:Q5ZLS2
Proteomes UP000000539
GO GO:0000932
GO:0003723
Gene3D 3.40.50.10260
InterPro IPR025762
IPR019050
IPR025609
IPR004443
Pfam PF09532
PF12701
PF03853
SUPFAM SSF64153
PROSITE PS51512
PS51385

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:1990174

phosphodiesterase decapping endonuclease activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q96F86

F

Seeded From UniProt

complete

involved_in

GO:0033962

cytoplasmic mRNA processing body assembly

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000341086
SGD:S000000741
UniProtKB:Q5AXT7

P

Seeded From UniProt

complete

involved_in

GO:0031087

deadenylation-independent decapping of nuclear-transcribed mRNA

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000341086
PomBase:SPBC18E5.11c
SGD:S000000741
UniProtKB:Q5AXT7

P

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000341086
SGD:S000000741

F

Seeded From UniProt

complete

part_of

GO:0000932

P-body

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0036735
PANTHER:PTN000341086
PomBase:SPBC18E5.11c
SGD:S000000741

C

Seeded From UniProt

complete

involved_in

GO:0090502

RNA phosphodiester bond hydrolysis, endonucleolytic

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:1990174

P

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR034107

F

Seeded From UniProt

complete

involved_in

GO:0031087

deadenylation-independent decapping of nuclear-transcribed mRNA

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR034107

P

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963

C

Seeded From UniProt

complete

part_of

GO:0000932

P-body

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0230

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page