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CHICK:COPB

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) COPB1 (synonyms: COPB)
Protein Name(s) Coatomer subunit beta

Beta-coat protein Beta-COP

External Links
UniProt Q5ZIA5
EMBL AJ720879
RefSeq NP_001006467.1
UniGene Gga.3647
ProteinModelPortal Q5ZIA5
BioGrid 683642
STRING 9031.ENSGALP00000009665
PaxDb Q5ZIA5
PRIDE Q5ZIA5
Ensembl ENSGALT00000009679
GeneID 423063
KEGG gga:423063
CTD 1315
eggNOG COG5096
GeneTree ENSGT00390000005270
HOGENOM HOG000207417
HOVERGEN HBG005380
InParanoid Q5ZIA5
KO K17301
OMA SGFCGFM
OrthoDB EOG7ZWD12
PhylomeDB Q5ZIA5
TreeFam TF105737
Reactome REACT_337411
NextBio 20825590
PRO PR:Q5ZIA5
Proteomes UP000000539
GO GO:0030126
GO:0005198
GO:0006886
GO:0016192
Gene3D 1.25.10.10
InterPro IPR011989
IPR016024
IPR002553
IPR011710
IPR016460
IPR029446
PANTHER PTHR10635
Pfam PF01602
PF07718
PF14806
PIRSF PIRSF005727
SUPFAM SSF48371

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0030126

COPI vesicle coat

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000067242
RGD:620861
SGD:S000002646

C

Seeded From UniProt

complete

involved_in

GO:0006891

intra-Golgi vesicle-mediated transport

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000067242
RGD:620861

P

Seeded From UniProt

complete

involved_in

GO:0006888

endoplasmic reticulum to Golgi vesicle-mediated transport

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000067242
SGD:S000002646

P

Seeded From UniProt

complete

part_of

GO:0043231

intracellular membrane-bounded organelle

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P53618
ensembl:ENSP00000249923

C

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P53618
ensembl:ENSP00000249923

C

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P53618
ensembl:ENSP00000249923

C

Seeded From UniProt

complete

part_of

GO:0030137

COPI-coated vesicle

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9JIF7
ensembl:ENSMUSP00000033012

C

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9JIF7
ensembl:ENSMUSP00000033012

C

Seeded From UniProt

complete

enables

GO:0005198

structural molecule activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011710

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR016460

C

Seeded From UniProt

complete

involved_in

GO:0006886

intracellular protein transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002553
InterPro:IPR011710
InterPro:IPR016460

P

Seeded From UniProt

complete

involved_in

GO:0016192

vesicle-mediated transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002553
InterPro:IPR011710

P

Seeded From UniProt

complete

part_of

GO:0030117

membrane coat

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002553

C

Seeded From UniProt

complete

part_of

GO:0030126

COPI vesicle coat

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011710

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

involved_in

GO:0015031

protein transport

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0653

P

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0333

C

Seeded From UniProt

complete

part_of

GO:0031410

cytoplasmic vesicle

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0968

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

involved_in

GO:0016192

vesicle-mediated transport

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0931

P

Seeded From UniProt

complete

part_of

GO:0030663

COPI-coated vesicle membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0076

C

Seeded From UniProt

complete

part_of

GO:0000139

Golgi membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0134

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page