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CHICK:COL12

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) COLEC12 (synonyms: CL3)
Protein Name(s) Collectin-12

Collectin-3 CL-3 cCL-3

External Links
UniProt Q2LK54
EMBL DQ157755
RefSeq NP_001034688.1
UniGene Gga.33741
ProteinModelPortal Q2LK54
SMR Q2LK54
STRING 9031.ENSGALP00000030293
PaxDb Q2LK54
GeneID 421061
KEGG gga:421061
CTD 81035
eggNOG NOG147335
HOGENOM HOG000111886
HOVERGEN HBG107745
InParanoid Q2LK54
KO K10062
PhylomeDB Q2LK54
NextBio 20823888
PRO PR:Q2LK54
Proteomes UP000000539
GO GO:0005581
GO:0016021
GO:0030246
GO:0046872
Gene3D 3.10.100.10
InterPro IPR001304
IPR016186
IPR018378
IPR016187
IPR008160
Pfam PF01391
PF00059
SMART SM00034
SUPFAM SSF56436
PROSITE PS00615
PS50041

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0031012

extracellular matrix

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:88445
MGI:MGI:88446
MGI:MGI:88452
MGI:MGI:88453
MGI:MGI:88457
MGI:MGI:88467
PANTHER:PTN002513067

C

Seeded From UniProt

complete

enables

GO:0030169

low-density lipoprotein particle binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002771068
UniProtKB:Q5KU26

F

Seeded From UniProt

complete

enables

GO:0008329

signaling pattern recognition receptor activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002771068
UniProtKB:Q5KU26

F

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:88452
MGI:MGI:88468
PANTHER:PTN002513067
RGD:61817
RGD:70936
RGD:727898
UniProtKB:P02452
UniProtKB:P02458
UniProtKB:P02461
UniProtKB:P08123
UniProtKB:Q9BXS0

C

Seeded From UniProt

complete

involved_in

GO:0002221

pattern recognition receptor signaling pathway

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0008329

P

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472
UniProtKB-SubCell:SL-0162

C

Seeded From UniProt

complete

part_of

GO:0005581

collagen trimer

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0176

C

Seeded From UniProt

complete

enables

GO:0030246

carbohydrate binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0430

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page