CHICK:COCH

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	COCH (synonyms: COCH5B2)
Protein Name(s)	Cochlin COCH-5B2
External Links
UniProt	O42163
EMBL	AF012252
RefSeq	NP_990268.1
UniGene	Gga.2805
ProteinModelPortal	O42163
SMR	O42163
BioGrid	676053
IntAct	O42163
STRING	9031.ENSGALP00000037066
PaxDb	O42163
GeneID	395779
KEGG	gga:395779
CTD	1690
eggNOG	NOG277584
HOGENOM	HOG000013195
HOVERGEN	HBG005372
InParanoid	O42163
OrthoDB	EOG71RXJM
PhylomeDB	O42163
NextBio	20815847
PRO	PR:O42163
Proteomes	UP000000539
ExpressionAtlas	O42163
GO	GO:0070062 GO:0031012 GO:0005578 GO:0005518 GO:0042742 GO:0045089 GO:0008360 GO:0007605
Gene3D	2.170.130.20 3.40.50.410
InterPro	IPR030743 IPR004043 IPR002035
PANTHER	PTHR22992:SF84
Pfam	PF03815 PF00092
SMART	SM00603 SM00327
SUPFAM	SSF53300 SSF69848
PROSITE	PS50820 PS50234

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
part_of	GO:0062023	collagen-containing extracellular matrix	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:O43405	C		Seeded From UniProt	complete
enables	GO:0005518	collagen binding	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:O43405	F		Seeded From UniProt	complete
part_of	GO:0062023	collagen-containing extracellular matrix		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:109613 MGI:MGI:1341272 MGI:MGI:1921449 MGI:MGI:2179729 MGI:MGI:2684334 MGI:MGI:88462 PANTHER:PTN001523162 UniProtKB:O43405 ZFIN:ZDB-GENE-030131-9889	C		Seeded From UniProt	complete
part_of	GO:0031012	extracellular matrix		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:106591 MGI:MGI:109613 MGI:MGI:1278313 MGI:MGI:1328350 MGI:MGI:1921449 MGI:MGI:2179729 MGI:MGI:88459 MGI:MGI:88460 MGI:MGI:88461 PANTHER:PTN001523162 UniProtKB:P12111	C		Seeded From UniProt	complete
part_of	GO:0005615	extracellular space		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:2684334 MGI:MGI:88461 MGI:MGI:96924 PANTHER:PTN001523162 RGD:3055 RGD:67380 UniProtKB:P11226 UniProtKB:Q5GFL6	C		Seeded From UniProt	complete
involved_in	GO:0003429	growth plate cartilage chondrocyte morphogenesis		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:106591 PANTHER:PTN001523162	P		Seeded From UniProt	complete
part_of	GO:0062023	collagen-containing extracellular matrix	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O43405 ensembl:ENSP00000496360	C		Seeded From UniProt	complete
involved_in	GO:0008360	regulation of cell shape	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O43405 ensembl:ENSP00000496360	P		Seeded From UniProt	complete
enables	GO:0005518	collagen binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O43405 ensembl:ENSP00000496360	F		Seeded From UniProt	complete
part_of	GO:0031012	extracellular matrix	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q62507 ensembl:ENSMUSP00000128127	C		Seeded From UniProt	complete
involved_in	GO:0007605	sensory perception of sound	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q62507 ensembl:ENSMUSP00000128127	P		Seeded From UniProt	complete
involved_in	GO:0042742	defense response to bacterium	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR030743	P		Seeded From UniProt	complete
involved_in	GO:0045089	positive regulation of innate immune response	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR030743	P		Seeded From UniProt	complete
part_of	GO:0062023	collagen-containing extracellular matrix	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR030743	C		Seeded From UniProt	complete
part_of	GO:0005576	extracellular region	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0964 UniProtKB-SubCell:SL-0243	C		Seeded From UniProt	complete
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References

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