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CHICK:CO6A3

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) COL6A3
Protein Name(s) Collagen alpha-3(VI) chain
External Links
UniProt P15989
EMBL M24282
PIR A37797
UniGene Gga.888
ProteinModelPortal P15989
SMR P15989
STRING 9031.ENSGALP00000006240
PaxDb P15989
PRIDE P15989
CTD 1293
eggNOG NOG237718
HOGENOM HOG000168250
HOVERGEN HBG051052
InParanoid P15989
PhylomeDB P15989
NextBio 20816584
PRO PR:P15989
Proteomes UP000000539
GO GO:0005581
GO:0005578
GO:0004867
GO:0007155
Gene3D 3.40.50.410
4.10.410.10
InterPro IPR008160
IPR003961
IPR002223
IPR020901
IPR002035
Pfam PF01391
PF00014
PF00092
PRINTS PR00759
SMART SM00060
SM00131
SM00327
SUPFAM SSF49265
SSF53300
SSF57362
PROSITE PS00280
PS50279
PS50853
PS50234

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0062023

collagen-containing extracellular matrix

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:109613
MGI:MGI:1341272
MGI:MGI:1921449
MGI:MGI:2179729
MGI:MGI:2684334
MGI:MGI:88462
PANTHER:PTN001523162
UniProtKB:O43405
ZFIN:ZDB-GENE-030131-9889

C

Seeded From UniProt

complete

part_of

GO:0031012

extracellular matrix

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:106591
MGI:MGI:109613
MGI:MGI:1278313
MGI:MGI:1328350
MGI:MGI:1921449
MGI:MGI:2179729
MGI:MGI:88459
MGI:MGI:88460
MGI:MGI:88461
PANTHER:PTN001523162
UniProtKB:P12111

C

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:2684334
MGI:MGI:88461
MGI:MGI:96924
PANTHER:PTN001523162
RGD:3055
RGD:67380
UniProtKB:P11226
UniProtKB:Q5GFL6

C

Seeded From UniProt

complete

involved_in

GO:0003429

growth plate cartilage chondrocyte morphogenesis

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:106591
PANTHER:PTN001523162

P

Seeded From UniProt

complete

involved_in

GO:0010951

negative regulation of endopeptidase activity

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0004867

P

Seeded From UniProt

complete

involved_in

GO:0010951

negative regulation of endopeptidase activity

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0004867

P

Seeded From UniProt

complete

enables

GO:0004867

serine-type endopeptidase inhibitor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002223
InterPro:IPR036880

F

Seeded From UniProt

complete

enables

GO:0030414

peptidase inhibitor activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0646

F

Seeded From UniProt

complete

part_of

GO:0005576

extracellular region

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0964

C

Seeded From UniProt

complete

involved_in

GO:0010466

negative regulation of peptidase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0646

P

Seeded From UniProt

complete

part_of

GO:0005581

collagen trimer

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0176

C

Seeded From UniProt

complete

enables

GO:0004867

serine-type endopeptidase inhibitor activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0722

F

Seeded From UniProt

complete

involved_in

GO:0007155

cell adhesion

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0130

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page