CHICK:CAD13

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	CDH13
Protein Name(s)	Cadherin-13 Truncated cadherin T-cad T-cadherin
External Links
UniProt	P33150
EMBL	M81779 S62757
PIR	I51206 JU0279
RefSeq	NP_001001760.1
UniGene	Gga.24273
PDB	3K5S 3K6I
PDBsum	3K5S 3K6I
ProteinModelPortal	P33150
SMR	P33150
DIP	DIP-58996N
STRING	9031.ENSGALP00000038306
PaxDb	P33150
GeneID	414849
KEGG	gga:414849
CTD	1012
eggNOG	NOG304703
HOGENOM	HOG000231254
HOVERGEN	HBG106438
InParanoid	P33150
KO	K06808
PhylomeDB	P33150
EvolutionaryTrace	P33150
NextBio	20818745
PRO	PR:P33150
Proteomes	UP000000539
GO	GO:0031225 GO:0005886 GO:0005509 GO:0007156
Gene3D	2.60.40.60
InterPro	IPR002126 IPR015919 IPR020894 IPR014868
Pfam	PF00028 PF08758
PRINTS	PR00205
SMART	SM00112 SM01055
SUPFAM	SSF49313
PROSITE	PS00232 PS50268

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
part_of	GO:0099512	supramolecular fiber	PMID:1707785^[1]	ECO:0000314	direct assay evidence used in manual assertion		C	part_of:(UBERON:0002329)\|part_of:(UBERON:0003089)\|part_of:(UBERON:0003082)	Seeded From UniProt	complete
part_of	GO:0009986	cell surface	PMID:1707785^[1]	ECO:0000314	direct assay evidence used in manual assertion		C	part_of:(UBERON:0002329)\|part_of:(UBERON:0003089)\|part_of:(UBERON:0003082)	Seeded From UniProt	complete
involved_in	GO:0098609	cell-cell adhesion	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:105057 MGI:MGI:88354 MGI:MGI:88356 PANTHER:PTN000616280 RGD:69280 UniProtKB:O93319 UniProtKB:P12830 UniProtKB:Q86UP0	P		Seeded From UniProt	complete
enables	GO:0045296	cadherin binding	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000616280 UniProtKB:P10288 UniProtKB:P55290	F		Seeded From UniProt	complete
involved_in	GO:0044331	cell-cell adhesion mediated by cadherin	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:88355 PANTHER:PTN000616280 UniProtKB:P10288	P		Seeded From UniProt	complete
enables	GO:0042803	protein homodimerization activity	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:99551 PANTHER:PTN000616280	F		Seeded From UniProt	complete
involved_in	GO:0034332	adherens junction organization	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000616280 UniProtKB:P12830 ZFIN:ZDB-GENE-990415-171	P		Seeded From UniProt	complete
part_of	GO:0016342	catenin complex	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:88354 PANTHER:PTN000616280 UniProtKB:P12830 UniProtKB:P19022 ZFIN:ZDB-GENE-990415-171	C		Seeded From UniProt	complete
involved_in	GO:0016339	calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1095414 MGI:MGI:88354 MGI:MGI:88355 PANTHER:PTN000616280 RGD:2321 RGD:69280 UniProtKB:P55290	P		Seeded From UniProt	complete
part_of	GO:0009986	cell surface	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1095414 MGI:MGI:88354 MGI:MGI:88355 PANTHER:PTN000616280 UniProtKB:P10288 UniProtKB:P33150 UniProtKB:P33151	C		Seeded From UniProt	complete
enables	GO:0008092	cytoskeletal protein binding	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:88354 PANTHER:PTN000616280	F		Seeded From UniProt	complete
involved_in	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1095414 MGI:MGI:88355 MGI:MGI:99218 PANTHER:PTN000616280 UniProtKB:P55290	P		Seeded From UniProt	complete
involved_in	GO:0007043	cell-cell junction assembly	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000616280 UniProtKB:P33151	P		Seeded From UniProt	complete
part_of	GO:0005913	cell-cell adherens junction	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:105057 MGI:MGI:88354 MGI:MGI:88356 PANTHER:PTN000616280 RGD:69280 UniProtKB:P10288 UniProtKB:P12830 UniProtKB:P19022 UniProtKB:P33151	C		Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:105057 MGI:MGI:107435 MGI:MGI:1095414 MGI:MGI:88354 MGI:MGI:88355 MGI:MGI:88356 MGI:MGI:99217 MGI:MGI:99551 PANTHER:PTN000616280 RGD:619745 RGD:621089 RGD:69279 RGD:69280 UniProtKB:O93319 UniProtKB:P10288 UniProtKB:P12830 UniProtKB:P19022 UniProtKB:P22223 UniProtKB:P33151 UniProtKB:P55283 UniProtKB:P55290 UniProtKB:Q6ZTQ4 UniProtKB:Q90763 ZFIN:ZDB-GENE-010606-1	C		Seeded From UniProt	complete
enables	GO:0005509	calcium ion binding	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:88354 PANTHER:PTN000616280 UniProtKB:Q86UP0	F		Seeded From UniProt	complete
involved_in	GO:0002040	sprouting angiogenesis	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000616660 UniProtKB:P55290	P		Seeded From UniProt	complete
involved_in	GO:0000902	cell morphogenesis	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000616280 ZFIN:ZDB-GENE-990415-171	P		Seeded From UniProt	complete
enables	GO:0071813	lipoprotein particle binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	F		Seeded From UniProt	complete
involved_in	GO:0055096	low-density lipoprotein particle mediated signaling	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0051668	localization within membrane	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0050927	positive regulation of positive chemotaxis	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0050850	positive regulation of calcium-mediated signaling	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0048661	positive regulation of smooth muscle cell proliferation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0045944	positive regulation of transcription by RNA polymerase II	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
enables	GO:0045296	cadherin binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	F		Seeded From UniProt	complete
involved_in	GO:0043616	keratinocyte proliferation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0043542	endothelial cell migration	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
part_of	GO:0043005	neuron projection	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	C		Seeded From UniProt	complete
involved_in	GO:0042058	regulation of epidermal growth factor receptor signaling pathway	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0030335	positive regulation of cell migration	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
enables	GO:0030169	low-density lipoprotein particle binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	F		Seeded From UniProt	complete
involved_in	GO:0030100	regulation of endocytosis	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0030032	lamellipodium assembly	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0016601	Rac protein signal transduction	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0016339	calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0008285	negative regulation of cell population proliferation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0007266	Rho protein signal transduction	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0007162	negative regulation of cell adhesion	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
part_of	GO:0005901	caveola	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	C		Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	C		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	C		Seeded From UniProt	complete
part_of	GO:0005615	extracellular space	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	C		Seeded From UniProt	complete
involved_in	GO:0002040	sprouting angiogenesis	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0001954	positive regulation of cell-matrix adhesion	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
involved_in	GO:0001938	positive regulation of endothelial cell proliferation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P55290 ensembl:ENSP00000268613	P		Seeded From UniProt	complete
enables	GO:0055100	adiponectin binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9WTR5 ensembl:ENSMUSP00000113527	F		Seeded From UniProt	complete
enables	GO:0042803	protein homodimerization activity	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9WTR5 ensembl:ENSMUSP00000113527	F		Seeded From UniProt	complete
part_of	GO:0009897	external side of plasma membrane	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9WTR5 ensembl:ENSMUSP00000113527	C		Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9WTR5 ensembl:ENSMUSP00000113527	C		Seeded From UniProt	complete
enables	GO:0005509	calcium ion binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002126 InterPro:IPR015919	F		Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR020894	C		Seeded From UniProt	complete
involved_in	GO:0007155	cell adhesion	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR020894 InterPro:IPR033216	P		Seeded From UniProt	complete
involved_in	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002126	P		Seeded From UniProt	complete
part_of	GO:0016020	membrane	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002126 InterPro:IPR015919	C		Seeded From UniProt	complete
enables	GO:0042803	protein homodimerization activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR033216	F		Seeded From UniProt	complete
involved_in	GO:0098609	cell-cell adhesion	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR039808	P		Seeded From UniProt	complete
part_of	GO:0099512	supramolecular fiber	PMID:1707785^[1]	ECO:0000314	direct assay evidence used in manual assertion		C	part_of:(UBERON:0002329)\|part_of:(UBERON:0003089)\|part_of:(UBERON:0003082)	Seeded From UniProt	complete
part_of	GO:0009986	cell surface	PMID:1707785^[1]	ECO:0000314	direct assay evidence used in manual assertion		C	part_of:(UBERON:0002329)\|part_of:(UBERON:0003089)\|part_of:(UBERON:0003082)	Seeded From UniProt	complete
involved_in	GO:0007155	cell adhesion	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0130	P		Seeded From UniProt	complete
part_of	GO:0016020	membrane	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0472	C		Seeded From UniProt	complete
enables	GO:0046872	metal ion binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0479	F		Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-1003 UniProtKB-SubCell:SL-0039	C		Seeded From UniProt	complete
part_of	GO:0031225	anchored component of membrane	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0336	C		Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 ^1.3 Ranscht, B & Bronner-Fraser, M (1991) T-cadherin expression alternates with migrating neural crest cells in the trunk of the avian embryo. Development 111 15-22 PubMed GONUTS page
↑ ^2.00 ^2.01 ^2.02 ^2.03 ^2.04 ^2.05 ^2.06 ^2.07 ^2.08 ^2.09 ^2.10 ^2.11 ^2.12 ^2.13 ^2.14 ^2.15 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:1707785-1] 1.0 ^1.1 ^1.2 ^1.3 Ranscht, B & Bronner-Fraser, M (1991) T-cadherin expression alternates with migrating neural crest cells in the trunk of the avian embryo. Development 111 15-22 PubMed GONUTS page

[PMID:21873635-2] 2.00 ^2.01 ^2.02 ^2.03 ^2.04 ^2.05 ^2.06 ^2.07 ^2.08 ^2.09 ^2.10 ^2.11 ^2.12 ^2.13 ^2.14 ^2.15 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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CHICK:CAD13

Contents

Annotations

Notes

References

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