GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CHICK:A9QM68

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) OPN4-1 (ECO:0000313 with EMBL:ABX10830.1)
Protein Name(s) Melanopsin 1 isoform L (ECO:0000313 with EMBL:ABX10830.1)
External Links
UniProt A9QM68
EMBL EU124630
RefSeq NP_989956.2
UniGene Gga.970
ProteinModelPortal A9QM68
PaxDb A9QM68
GeneID 395334
KEGG gga:395334
CTD 395334
eggNOG NOG255465
HOGENOM HOG000264261
HOVERGEN HBG007871
KO K04255
GO GO:0016021
GO:0004930
GO:0009881
GO:0007602
GO:0018298
GO:0007601
InterPro IPR000276
IPR017452
IPR001760
IPR027430
Pfam PF00001
PRINTS PR00237
PR00238
PROSITE PS00237
PS50262
PS00238

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0030424

axon

PMID:21676907[1]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(UBERON:0001793)

Seeded From UniProt

complete

part_of

GO:0044297

cell body

PMID:21676907[1]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0000745)

Seeded From UniProt

complete

part_of

GO:0043005

neuron projection

PMID:21676907[1]

ECO:0000314

direct assay evidence used in manual assertion

C

  • part_of:(CL:0000740)
  • part_of:(CL:0000745)

Seeded From UniProt

complete

part_of

GO:0005623

cell

PMID:21676907[1]

ECO:0000314

direct assay evidence used in manual assertion

C

  • part_of:(UBERON:0004904)
  • part_of:(UBERON:0001795)
  • part_of:(UBERON:0001790)
  • part_of:(UBERON:0001792)

Seeded From UniProt

complete

involved_in

GO:0071482

cellular response to light stimulus

PMID:16856781[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0018298

protein-chromophore linkage

PMID:17977531[3]

ECO:0000314

direct assay evidence used in manual assertion

P

has_participant:(CHEBI:16066)

Seeded From UniProt

complete

part_of

GO:0016020

membrane

PMID:17977531[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0016038

absorption of visible light

PMID:17977531[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0004930

G protein-coupled receptor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000276

F

Seeded From UniProt

complete

involved_in

GO:0007186

G protein-coupled receptor signaling pathway

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000276
InterPro:IPR001760

P

Seeded From UniProt

complete

involved_in

GO:0007601

visual perception

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001760

P

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000276
InterPro:IPR001760
InterPro:IPR017452

C

Seeded From UniProt

complete

involved_in

GO:0018298

protein-chromophore linkage

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0157

P

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

involved_in

GO:0007602

phototransduction

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0681

P

Seeded From UniProt

complete

enables

GO:0009881

photoreceptor activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0600

F

Seeded From UniProt

complete

involved_in

GO:0007165

signal transduction

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0807

P

Seeded From UniProt

complete

involved_in

GO:0050896

response to stimulus

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0716

P

Seeded From UniProt

complete

involved_in

GO:0007186

G protein-coupled receptor signaling pathway

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0297

P

Seeded From UniProt

complete

enables

GO:0004930

G protein-coupled receptor activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0297

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000040

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-SubCell:SL-0162

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Verra, DM et al. (2011) Early onset and differential temporospatial expression of melanopsin isoforms in the developing chicken retina. Invest. Ophthalmol. Vis. Sci. 52 5111-20 PubMed GONUTS page
  2. Bellingham, J et al. (2006) Evolution of melanopsin photoreceptors: discovery and characterization of a new melanopsin in nonmammalian vertebrates. PLoS Biol. 4 e254 PubMed GONUTS page
  3. 3.0 3.1 3.2 Torii, M et al. (2007) Two isoforms of chicken melanopsins show blue light sensitivity. FEBS Lett. 581 5327-31 PubMed GONUTS page