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CELJU:B3PDN7

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Species (Taxon ID) Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.cellulosa). (498211)
Gene Name(s) cel3B (ECO:0000313 with EMBL:ACE83024.1)
Protein Name(s) Glucan 1,4-beta-glucosidase, putative, cel3B (ECO:0000313 with EMBL:ACE83024.1)
External Links
UniProt B3PDN7
EMBL CP000934
RefSeq WP_012487127.1
ProteinModelPortal B3PDN7
STRING 498211.CJA_1497
CAZy GH3
EnsemblBacteria ACE83024
KEGG cja:CJA_1497
eggNOG ENOG4107QK4
COG1472
HOGENOM HOG000031214
OMA PMWVNAE
OrthoDB 419160at2
BioCyc CJAP498211:G1GB3-1508-MONOMER
Proteomes UP000001036
GO GO:0031217
GO:0005975
Gene3D 3.20.20.300
3.40.50.1700
InterPro IPR002772
IPR036881
IPR001764
IPR036962
IPR017853
Pfam PF00933
PF01915
PRINTS PR00133
SUPFAM SSF51445
SSF52279

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0004553

hydrolase activity, hydrolyzing O-glycosyl compounds

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001764
InterPro:IPR002772
InterPro:IPR036881
InterPro:IPR036962

F

Seeded From UniProt

involved_in

GO:0005975

carbohydrate metabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001764
InterPro:IPR002772
InterPro:IPR036881
InterPro:IPR036962

P

Seeded From UniProt

enables

GO:0031217

glucan 1,4-beta-glucosidase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:3.2.1.74

F

Seeded From UniProt

enables

GO:0016787

hydrolase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

involved_in

GO:0008152

metabolic process

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0326

P

Seeded From UniProt

enables

GO:0016798

hydrolase activity, acting on glycosyl bonds

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0326

F

Seeded From UniProt

enables

GO:0004553

hydrolase activity, hydrolyzing O-glycosyl compounds

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001764
InterPro:IPR002772
InterPro:IPR036881
InterPro:IPR036962

F

Seeded From UniProt

involved_in

GO:0005975

carbohydrate metabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001764
InterPro:IPR002772
InterPro:IPR036881
InterPro:IPR036962

P

Seeded From UniProt

enables

GO:0031217

glucan 1,4-beta-glucosidase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:3.2.1.74

F

Seeded From UniProt

enables

GO:0016787

hydrolase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

involved_in

GO:0008152

metabolic process

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0326

P

Seeded From UniProt

enables

GO:0016798

hydrolase activity, acting on glycosyl bonds

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0326

F

Seeded From UniProt

GO:2000892

cellobiose catabolic process

PMID:28118504[1]

ECO:0001225

knockout evidence used in manual assertion

P

Mutant strains with individual and combinatorial mutations were generated and growth assays were conducted to determine which genes were essential for allowing Cellvibrio japonicus to metabolize cellobiose, a disaccharide that composes cellulose. According to Figure 1A, cel3B deletion most significantly hinders growth of C. japonicus on cellobiose. Figure 2D also showed that the cel3B single mutants (triangles) had decreased cellobiose consumption and a longer lag phase compared to the wild type (circles). This shows that the gene product of cel3B, an enzyme, helps the cell use cellobiose as a carbon source.

complete
CACAO 13660

GO:2000891

cellobiose metabolic process

PMID:28118504[1]

ECO:0001147

anion-exchange chromatography evidence used in manual assertion

P

In Figure 2, wild type C. japonicus and cel3b, cel3Acel3B, and 4BG mutants were grown on cellobiose and glucose (control). The four strains showed no significant changes in glucose consumption during growth (Fig. 2A & 2B). However, the cel3b mutant showed a decreased rate of cellobiose consumption (Fig. 2C & 2D). This shows that cel3b has a role in efficient cellobiose utilization in C. japonicus.

complete
CACAO 13722

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Nelson, CE et al. (2017) Systems analysis in Cellvibrio japonicus resolves predicted redundancy of β-glucosidases and determines essential physiological functions. Mol. Microbiol. 104 294-305 PubMed GONUTS page