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CELJU:B3PDN7
Contents
Species (Taxon ID) | Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.cellulosa). (498211) | |
Gene Name(s) | cel3B (ECO:0000313 with EMBL:ACE83024.1) | |
Protein Name(s) | Glucan 1,4-beta-glucosidase, putative, cel3B (ECO:0000313 with EMBL:ACE83024.1) | |
External Links | ||
UniProt | B3PDN7 | |
EMBL | CP000934 | |
RefSeq | WP_012487127.1 | |
ProteinModelPortal | B3PDN7 | |
STRING | 498211.CJA_1497 | |
CAZy | GH3 | |
EnsemblBacteria | ACE83024 | |
KEGG | cja:CJA_1497 | |
eggNOG | ENOG4107QK4 COG1472 | |
HOGENOM | HOG000031214 | |
OMA | PMWVNAE | |
OrthoDB | 419160at2 | |
BioCyc | CJAP498211:G1GB3-1508-MONOMER | |
Proteomes | UP000001036 | |
GO | GO:0031217 GO:0005975 | |
Gene3D | 3.20.20.300 3.40.50.1700 | |
InterPro | IPR002772 IPR036881 IPR001764 IPR036962 IPR017853 | |
Pfam | PF00933 PF01915 | |
PRINTS | PR00133 | |
SUPFAM | SSF51445 SSF52279 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
enables |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001764 |
F |
Seeded From UniProt |
|||
involved_in |
GO:0005975 |
carbohydrate metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001764 |
P |
Seeded From UniProt |
|||
enables |
GO:0031217 |
glucan 1,4-beta-glucosidase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
involved_in |
GO:0008152 |
metabolic process |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
P |
Seeded From UniProt |
||||
enables |
GO:0016798 |
hydrolase activity, acting on glycosyl bonds |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001764 |
F |
Seeded From UniProt |
|||
involved_in |
GO:0005975 |
carbohydrate metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001764 |
P |
Seeded From UniProt |
|||
enables |
GO:0031217 |
glucan 1,4-beta-glucosidase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
involved_in |
GO:0008152 |
metabolic process |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
P |
Seeded From UniProt |
||||
enables |
GO:0016798 |
hydrolase activity, acting on glycosyl bonds |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
GO:2000892 |
cellobiose catabolic process |
ECO:0001225 |
knockout evidence used in manual assertion |
P |
Mutant strains with individual and combinatorial mutations were generated and growth assays were conducted to determine which genes were essential for allowing Cellvibrio japonicus to metabolize cellobiose, a disaccharide that composes cellulose. According to Figure 1A, cel3B deletion most significantly hinders growth of C. japonicus on cellobiose. Figure 2D also showed that the cel3B single mutants (triangles) had decreased cellobiose consumption and a longer lag phase compared to the wild type (circles). This shows that the gene product of cel3B, an enzyme, helps the cell use cellobiose as a carbon source. |
complete | ||||
GO:2000891 |
cellobiose metabolic process |
ECO:0001147 |
anion-exchange chromatography evidence used in manual assertion |
P |
In Figure 2, wild type C. japonicus and cel3b, cel3Acel3B, and 4BG mutants were grown on cellobiose and glucose (control). The four strains showed no significant changes in glucose consumption during growth (Fig. 2A & 2B). However, the cel3b mutant showed a decreased rate of cellobiose consumption (Fig. 2C & 2D). This shows that cel3b has a role in efficient cellobiose utilization in C. japonicus. |
complete | ||||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Nelson, CE et al. (2017) Systems analysis in Cellvibrio japonicus resolves predicted redundancy of β-glucosidases and determines essential physiological functions. Mol. Microbiol. 104 294-305 PubMed GONUTS page
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