GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
Have any questions? Please email us at ecoliwiki@gmail.com
BURCJ:B4EMD0
Contents
Species (Taxon ID) | Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656/ NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315)). (216591) | |
Gene Name(s) | cepR (ECO:0000313 with EMBL:CAR55726.1) | |
Protein Name(s) | N-acylhomoserine lactone dependent regulatory protein CepR (ECO:0000313 with EMBL:CAR55726.1) | |
External Links | ||
UniProt | B4EMD0 | |
EMBL | AM747721 | |
RefSeq | WP_006483948.1 YP_002234479.1 | |
STRING | 216591.BCAM1868 | |
EnsemblBacteria | CAR55726 | |
GeneID | 6929502 | |
KEGG | bcj:BCAM1868 | |
PATRIC | 19083085 | |
eggNOG | COG2771 | |
HOGENOM | HOG000111053 | |
OMA | VMPPEMK | |
OrthoDB | EOG6P8TQG | |
BioCyc | BCEN216591:GJI4-5497-MONOMER | |
Proteomes | UP000001035 | |
GO | GO:0003677 GO:0003700 GO:0006351 | |
Gene3D | 1.10.10.10 3.30.450.80 | |
InterPro | IPR016032 IPR005143 IPR000792 IPR011991 | |
Pfam | PF03472 PF00196 | |
PRINTS | PR00038 | |
SMART | SM00421 | |
SUPFAM | SSF46894 SSF75516 | |
PROSITE | PS00622 PS50043 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
GO:0010628 |
positive regulation of gene expression |
ECO:0000315 |
P |
Fig 1, Table 1 and the section titled "CePR gene regulation" |
complete | |||||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ O'Grady, EP et al. (2009) Reciprocal regulation by the CepIR and CciIR quorum sensing systems in Burkholderia cenocepacia. BMC Genomics 10 441 PubMed GONUTS page