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BURCC:HFQ

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Species (Taxon ID) Burkholderia cenocepacia (strain MC0-3). (406425)
Gene Name(s) hfq (ECO:0000255 with HAMAP-Rule:MF_00436)
Protein Name(s) RNA-binding protein Hfq (ECO:0000255 with HAMAP-Rule:MF_00436)
External Links
UniProt B1JT87
EMBL CP000958
RefSeq YP_001765114.1
ProteinModelPortal B1JT87
SMR B1JT87
STRING 406425.Bcenmc03_1831
EnsemblBacteria ACA90992
GeneID 6123495
KEGG bcm:Bcenmc03_1831
PATRIC 19090754
eggNOG COG1923
HOGENOM HOG000004931
KO K03666
OMA RRDGHAQ
OrthoDB EOG68SW3W
BioCyc BCEN406425:GHD9-1878-MONOMER
Proteomes UP000002169
GO GO:0003723
GO:0006355
HAMAP MF_00436
InterPro IPR005001
IPR010920
IPR001163
Pfam PF01423
SUPFAM SSF50182
TIGRFAMs TIGR02383

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0010286

heat acclimation

PMID:21278292[1]

ECO:0000315

P

See Fig 7

complete

GO:0006979

response to oxidative stress

PMID:21278292[1]

ECO:0000315

P

See Fig 7

complete

enables

GO:0003723

RNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR005001

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR005001

P

Seeded From UniProt

complete

GO:0009405

pathogenesis

PMID:21278292[1]

ECO:0000314

P

See Fig 9A.

complete

enables

GO:0003723

RNA binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000030788

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Ramos, CG et al. (2011) The second RNA chaperone, Hfq2, is also required for survival under stress and full virulence of Burkholderia cenocepacia J2315. J. Bacteriol. 193 1515-26 PubMed GONUTS page