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BRADU:TARD
Contents
Species (Taxon ID) | Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC14792 / USDA 110). (224911) | |
Gene Name(s) | tarD | |
Protein Name(s) | D(-)-tartrate dehydratase | |
External Links | ||
UniProt | Q89FH0 | |
EMBL | BA000040 | |
RefSeq | NP_773370.1 WP_011089469.1 | |
PDB | 1TZZ 2DW6 2DW7 | |
PDBsum | 1TZZ 2DW6 2DW7 | |
ProteinModelPortal | Q89FH0 | |
STRING | 224911.bll6730 | |
EnsemblBacteria | BAC51995 | |
GeneID | 1050053 | |
KEGG | bja:bll6730 | |
PATRIC | 21197324 | |
eggNOG | ENOG4105CMJ COG4948 | |
HOGENOM | HOG000257327 | |
InParanoid | Q89FH0 | |
OrthoDB | EOG6Q2SGK | |
PhylomeDB | Q89FH0 | |
BioCyc | BJAP224911:GJEJ-6781-MONOMER | |
SABIO-RK | Q89FH0 | |
EvolutionaryTrace | Q89FH0 | |
PRO | PR:Q89FH0 | |
Proteomes | UP000002526 | |
GO | GO:0047808 GO:0000287 GO:0051260 | |
Gene3D | 3.20.20.120 3.30.390.10 | |
InterPro | IPR029065 IPR029017 IPR013342 IPR001354 | |
PANTHER | PTHR13794 | |
Pfam | PF13378 | |
SMART | SM00922 | |
SUPFAM | SSF51604 SSF54826 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0047808 |
D(-)-tartrate dehydratase activity |
ECO:0000314 |
F |
The first entry in Table 2 shows the kcat/Km value for the wild type protein catalyzing the reaction shown just below the table. The paper mentions a different organism but when the protein is traced back to the ncbi database (using the accession number in the abstract), this is the protein that shows up |
complete | |||||
enables |
GO:0047808 |
D(-)-tartrate dehydratase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051260 |
protein homooligomerization |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0000287 |
magnesium ion binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0047808 |
D(-)-tartrate dehydratase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0047808 |
D(-)-tartrate dehydratase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0047808 |
D(-)-tartrate dehydratase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016829 |
lyase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.