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BRADU:TARD

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Species (Taxon ID) Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC14792 / USDA 110). (224911)
Gene Name(s) tarD
Protein Name(s) D(-)-tartrate dehydratase
External Links
UniProt Q89FH0
EMBL BA000040
RefSeq NP_773370.1
WP_011089469.1
PDB 1TZZ
2DW6
2DW7
PDBsum 1TZZ
2DW6
2DW7
ProteinModelPortal Q89FH0
STRING 224911.bll6730
EnsemblBacteria BAC51995
GeneID 1050053
KEGG bja:bll6730
PATRIC 21197324
eggNOG ENOG4105CMJ
COG4948
HOGENOM HOG000257327
InParanoid Q89FH0
OrthoDB EOG6Q2SGK
PhylomeDB Q89FH0
BioCyc BJAP224911:GJEJ-6781-MONOMER
SABIO-RK Q89FH0
EvolutionaryTrace Q89FH0
PRO PR:Q89FH0
Proteomes UP000002526
GO GO:0047808
GO:0000287
GO:0051260
Gene3D 3.20.20.120
3.30.390.10
InterPro IPR029065
IPR029017
IPR013342
IPR001354
PANTHER PTHR13794
Pfam PF13378
SMART SM00922
SUPFAM SSF51604
SSF54826

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0047808

D(-)-tartrate dehydratase activity

PMID:17144653[1]

ECO:0000314

F

The first entry in Table 2 shows the kcat/Km value for the wild type protein catalyzing the reaction shown just below the table.

The paper mentions a different organism but when the protein is traced back to the ncbi database (using the accession number in the abstract), this is the protein that shows up

complete
CACAO 10145

enables

GO:0047808

D(-)-tartrate dehydratase activity

PMID:17144653[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0051260

protein homooligomerization

PMID:17144653[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0000287

magnesium ion binding

PMID:17144653[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0047808

D(-)-tartrate dehydratase activity

PMID:17144653[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0047808

D(-)-tartrate dehydratase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR034611

F

Seeded From UniProt

complete

enables

GO:0047808

D(-)-tartrate dehydratase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:4.2.1.81

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

enables

GO:0016829

lyase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0456

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 Yew, WS et al. (2006) Evolution of enzymatic activities in the enolase superfamily: D-tartrate dehydratase from Bradyrhizobium japonicum. Biochemistry 45 14598-608 PubMed GONUTS page