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BPSPP:Q38152
Contents
Species (Taxon ID) | Bacillus phage SPP1 (Bacteriophage SPP1). (10724) | |
Gene Name(s) | No Information Provided. | |
Protein Name(s) | Uncharacterized protein (ECO:0000313 with EMBL:CAA66496.1) | |
External Links | ||
UniProt | Q38152 | |
EMBL | X97918 | |
PIR | T42342 T42343 | |
RefSeq | NP_690733.1 | |
PDB | 3BGW 3BH0 | |
PDBsum | 3BGW 3BH0 | |
ProteinModelPortal | Q38152 | |
SMR | Q38152 | |
DIP | DIP-46406N | |
GeneID | 955307 | |
KEGG | vg:955307 | |
KO | K02314 | |
EvolutionaryTrace | Q38152 | |
Proteomes | UP000002559 | |
GO | GO:0005524 GO:0003677 GO:0003678 GO:0006260 | |
Gene3D | 1.10.860.10 3.40.50.300 | |
InterPro | IPR007692 IPR007694 IPR007693 IPR016136 IPR027417 | |
Pfam | PF00772 PF03796 | |
SUPFAM | SSF48024 SSF52540 | |
TIGRFAMs | TIGR00665 | |
PROSITE | PS51199 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0036121 |
double-stranded DNA-dependent ATP-dependent DNA helicase activity |
ECO:0000315 |
F |
Fig 4, Table 1. |
complete | |||||
GO:0006268 |
DNA unwinding involved in DNA replication |
ECO:0000315 |
P |
Figure 4 shows the effect of mutated residues on the protein and how the mutations effect the binding ability of the protein to primase using gel electrophoresus. Helicase binds to and unwinds the DNA prior to replication, and in complex with primase, puts down the DNA primer to initiate replication. When mutated the protein does no properly function and complex with primase to activate primase and initiate replication. Table 1 shows the series of deletions and mutations done to assess the helicase and ATPase activity in the presence and absence primase. DeltaN92 is the first series of deletions performed, deleting amino acids 1 to 92, this mutation decreased the DNA unwinding ability of the protein from 100% to 66% activity. DeltaN112 deleted amino acids 1-112. This deletion caused the DNA unwinding ability of helicase to stop almost completely, with a drop from 100% activity to 3% activity with this deletion. The double point mutation mt1 changed the amino acids I121A and E122A, resulting in a decrease in helicase activity to 7%. |
complete | |||||
Contributes to |
GO:1990077 |
primosome complex |
ECO:0000314 |
C |
figure 1 shows the hexameric structure of the SPP1 helicase, determined with x-ray crystallography. Helicase binds to and unwinds the DNA prior to replication, and in complex with primase, puts down the DNA primer to initiate replication. Figure 4d shows the binding of primase and helicase into a complex by gel shift, in the presence of primase the helicase complexes with the primase and migrates more slowly and a shorter distacne through the gel than in the absence of primase. Only the full length helicase is able to form a complex with primase. Helicase binds to and unwinds the DNA prior to replication, and in complex with primase, puts down the DNA primer to initiate replication. When mutated the protein does no properly function and complex with primase to activate primase and initiate replication. Table 1 shows the series of deletions and mutations done to assess the helicase and ATPase activity in the presence and absence primase. In the presence of primase, the ATPase activity more than doubles (1 to 2.3) and the helicase activity quadruples (1 to 4.6). |
complete | ||||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032508 |
DNA duplex unwinding |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0003678 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003678 |
DNA helicase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR007692 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR007692 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006260 |
DNA replication |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR007692 |
P |
Seeded From UniProt |
complete | ||
Notes
References
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