GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

BPPHS:CAPSD

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Enterobacteria phage phiX174 (Isolate Sanger) (Bacteriophagephi-X174). (1217068)
Gene Name(s) F
Protein Name(s) Capsid protein F

F protein GPF

External Links
UniProt P03641
EMBL J02482
PIR B93185
RefSeq NP_040711.1
PDB 1AL0
1CD3
1KVP
1PHX
2BPA
PDBsum 1AL0
1CD3
1KVP
1PHX
2BPA
ProteinModelPortal P03641
SMR P03641
DIP DIP-6198N
GeneID 2546408
KEGG vg:2546408
EvolutionaryTrace P03641
Proteomes UP000005893
GO GO:0030430
GO:0039615
GO:0005198
Gene3D 2.60.169.10
InterPro IPR016184
IPR003514
Pfam PF02305
SUPFAM SSF88645

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0039615

T=1 icosahedral viral capsid

PMID:1370343[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0039615

T=1 icosahedral viral capsid

PMID:8158636[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0039615

T=1 icosahedral viral capsid

PMID:11991963[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0005198

structural molecule activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003514
InterPro:IPR037002

F

Seeded From UniProt

complete

involved_in

GO:0046718

viral entry into host cell

GO_REF:0000037
GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1160
UniProtKB-KW:KW-1162

P

Seeded From UniProt

complete

part_of

GO:0039615

T=1 icosahedral viral capsid

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1140

C

Seeded From UniProt

complete

part_of

GO:0019012

virion

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0946
UniProtKB-SubCell:SL-0274

C

Seeded From UniProt

complete

part_of

GO:0019028

viral capsid

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0167

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. McKenna, R et al. (1992) Atomic structure of single-stranded DNA bacteriophage phi X174 and its functional implications. Nature 355 137-43 PubMed GONUTS page
  2. McKenna, R et al. (1994) Analysis of the single-stranded DNA bacteriophage phi X174, refined at a resolution of 3.0 A. J. Mol. Biol. 237 517-43 PubMed GONUTS page
  3. Hafenstein, S & Fane, BA (2002) phi X174 genome-capsid interactions influence the biophysical properties of the virion: evidence for a scaffolding-like function for the genome during the final stages of morphogenesis. J. Virol. 76 5350-6 PubMed GONUTS page