GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

BPPH2:CAPSF

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Bacillus phage phi29 (Bacteriophage phi-29). (10756)
Gene Name(s) 8.5 (ECO:0000312 with EMBL:ACE96031.1)
Protein Name(s) Capsid fiber protein (ECO:0000305)

Gene product 8.5 (ECO:0000305) gp8.5 (ECO:0000305) Head fiber protein (ECO:0000305) Protein p8.5 (ECO:0000305)

External Links
UniProt B3VMP4
EMBL EU771092
M14782
PIR C25816
RefSeq YP_002004537.1
PDB 3QC7
PDBsum 3QC7
GeneID 6446512
KEGG vg:6446512
EvolutionaryTrace P20344
Proteomes UP000001207
GO GO:0098022
GO:0046729
GO:0046718
GO:0019062
InterPro IPR022741
Pfam PF11133

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0046729

viral procapsid

PMID:22225806[1]

ECO:0000314

C

Figure 3.

complete
CACAO 6923

part_of

GO:0098022

viral capsid, fiber

PMID:409854[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0046729

viral procapsid

PMID:22225806[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

PMID:21383126[3]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:B3VMP4

F

Seeded From UniProt

complete

involved_in

GO:0016032

viral process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0945

P

Seeded From UniProt

complete

involved_in

GO:0046718

viral entry into host cell

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1160

P

Seeded From UniProt

complete

part_of

GO:0019012

virion

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0946
UniProtKB-SubCell:SL-0274

C

Seeded From UniProt

complete

involved_in

GO:0019062

virion attachment to host cell

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1161

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Fang, H et al. (2012) Role of channel lysines and the "push through a one-way valve" mechanism of the viral DNA packaging motor. Biophys. J. 102 127-35 PubMed GONUTS page
  2. Reilly, BE et al. (1977) Morphogenesis of bacteriophage phi 29 of Bacillus subtilis: mapping and functional analysis of the head fiber gene. J. Virol. 24 363-77 PubMed GONUTS page
  3. Xiang, Y & Rossmann, MG (2011) Structure of bacteriophage phi29 head fibers has a supercoiled triple repeating helix-turn-helix motif. Proc. Natl. Acad. Sci. U.S.A. 108 4806-10 PubMed GONUTS page