GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

BPP4:VINT

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Enterobacteria phage P4 (Bacteriophage P4). (10680)
Gene Name(s) int
Protein Name(s) Integrase
External Links
UniProt P08320
EMBL X51522
X05947
M27748
PIR JW0023
RefSeq NP_042035.1
ProteinModelPortal P08320
GeneID 1261092
KEGG vg:1261092
Proteomes UP000009093
GO GO:0003677
GO:0016787
GO:0016740
GO:0015074
GO:0006310
GO:0075713
GO:0046718
Gene3D 1.10.150.130
1.10.443.10
InterPro IPR011010
IPR025166
IPR013762
IPR002104
IPR023109
Pfam PF13356
PF00589
SUPFAM SSF56349

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0039695

DNA-templated viral transcription

PMID:16847139[1]

ECO:0000315

P

Figure 3 shows increasingly inhibited Int promoter transcription as increasingly larger fractions of the P4 Int gene are expressed. "Thus, when the P4 DNA fragment contained the whole int gene (pGM606) or at least 60 % of it (pGM605), the int mRNA abundance was greatly reduced, suggesting that Int negatively regulates transcription initiation at P int."

complete
CACAO 11996

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002104
InterPro:IPR011010
InterPro:IPR013762

F

Seeded From UniProt

complete

involved_in

GO:0006310

DNA recombination

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002104
InterPro:IPR013762

P

Seeded From UniProt

complete

involved_in

GO:0015074

DNA integration

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002104
InterPro:IPR013762

P

Seeded From UniProt

complete

involved_in

GO:0075713

establishment of integrated proviral latency

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1179

P

Seeded From UniProt

complete

involved_in

GO:0006310

DNA recombination

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0233

P

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

involved_in

GO:0046718

viral entry into host cell

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1160

P

Seeded From UniProt

complete

involved_in

GO:0015074

DNA integration

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0229

P

Seeded From UniProt

complete

involved_in

GO:0044826

viral genome integration into host DNA

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1179

P

Seeded From UniProt

complete

enables

GO:0016740

transferase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0808

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Piazzolla, D et al. (2006) Expression of phage P4 integrase is regulated negatively by both Int and Vis. J. Gen. Virol. 87 2423-31 PubMed GONUTS page