GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
BPP1:DARB
Contents
| Species (Taxon ID) | Escherichia phage P1 (Bacteriophage P1). (10678) | |
| Gene Name(s) | darB (ECO:0000312 with EMBL:AAQ14093.1) | |
| Protein Name(s) | Defense against restriction protein B (ECO:0000303 with PMID:3029954[1])
DarB (ECO:0000312 with EMBL:AAQ14093.1) | |
| External Links | ||
| UniProt | Q71TF8 | |
| EMBL | AF234172 AF234173 | |
| RefSeq | YP_006479.1 | |
| GeneID | 2777481 | |
| KEGG | vg:2777481 | |
| Proteomes | UP000001577 UP000008091 | |
| GO | GO:0019012 GO:0005524 GO:0003677 GO:0004386 GO:0008170 GO:0006306 GO:0099018 | |
| Gene3D | 3.40.50.10810 | |
| InterPro | IPR003356 IPR014001 IPR001650 IPR027417 IPR029063 IPR038718 IPR000330 | |
| Pfam | PF00271 PF02384 PF00176 | |
| SMART | SM00487 SM00490 | |
| SUPFAM | SSF52540 SSF53335 | |
| PROSITE | PS51192 PS51194 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0099018 |
restriction-modification system evasion by virus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
||||
|
involved_in |
GO:0099018 |
restriction-modification system evasion by virus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
||||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
|
involved_in |
GO:0006306 |
DNA methylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
|
enables |
GO:0008170 |
N-methyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
|
involved_in |
GO:0016032 |
viral process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
||||
|
enables |
GO:0004386 |
helicase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
|
involved_in |
GO:0099018 |
restriction-modification system evasion by virus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
||||
|
part_of |
GO:0019012 |
virion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
||||
|
involved_in |
GO:0099018 |
restriction-modification system evasion by virus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
||||
|
involved_in |
GO:0099018 |
restriction-modification system evasion by virus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
||||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
|
involved_in |
GO:0006306 |
DNA methylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
|
enables |
GO:0008170 |
N-methyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
|
involved_in |
GO:0016032 |
viral process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
||||
|
enables |
GO:0004386 |
helicase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
|
involved_in |
GO:0099018 |
restriction-modification system evasion by virus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
||||
|
part_of |
GO:0019012 |
virion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
||||
| GO:0099018 |
restriction-modification system evasion by virus |
ECO:0001835 |
infection assay evidence used in manual assertion |
P |
Fig. 2A shows that Defense against restriction protein B (DarB) is required protection of Escherichia phage P1 against EcoB and EcoK restriction using Efficiency of plating (EOP) assay |
complete | ||||
|
part_of |
GO:0019012 |
virion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
||||
| GO:0098061 |
viral capsid, internal space |
ECO:0001230 |
mass spectrometry evidence used in manual assertion |
C |
Fig. 5A shows that Defense against restriction protein B (DarB) of Escherichia phage P1 is incorporated inside the virion capsid using mass spectrometry. |
complete | ||||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Iida, S et al. (1987) Two DNA antirestriction systems of bacteriophage P1, darA, and darB: characterization of darA- phages. Virology 157 156-66 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Piya, D et al. (2017) The multicomponent antirestriction system of phage P1 is linked to capsid morphogenesis. Mol. Microbiol. 105 399-412 PubMed GONUTS page
