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BOVIN:CO1A1
Contents
Species (Taxon ID) | Bos taurus (Bovine). (9913) | |
Gene Name(s) | COL1A1 | |
Protein Name(s) | Collagen alpha-1(I) chain
Alpha-1 type I collagen | |
External Links | ||
UniProt | P02453 | |
EMBL | BC105184 | |
PIR | A91193 | |
RefSeq | NP_001029211.1 | |
UniGene | Bt.23316 | |
ProteinModelPortal | P02453 | |
IntAct | P02453 | |
PaxDb | P02453 | |
PRIDE | P02453 | |
Ensembl | ENSBTAT00000017420 | |
GeneID | 282187 | |
KEGG | bta:282187 | |
CTD | 1277 | |
eggNOG | NOG12793 | |
GeneTree | ENSGT00770000120467 | |
HOGENOM | HOG000085654 | |
HOVERGEN | HBG004933 | |
InParanoid | P02453 | |
KO | K06236 | |
OMA | KNCPGAQ | |
OrthoDB | EOG7TJ3HH | |
TreeFam | TF344135 | |
Reactome | REACT_204848 REACT_207047 REACT_208597 REACT_209041 REACT_215758 REACT_215983 REACT_219098 REACT_219927 REACT_220688 REACT_222217 REACT_222620 REACT_223425 REACT_224259 REACT_226104 | |
NextBio | 20806015 | |
PMAP-CutDB | P02453 | |
Proteomes | UP000009136 | |
ExpressionAtlas | P02453 | |
GO | GO:0005584 GO:0005737 GO:0005615 GO:0005201 GO:0046872 GO:0001568 GO:0060346 GO:0060351 GO:0071230 GO:0071260 GO:0032964 GO:0030199 GO:0048706 GO:0001958 GO:0060325 GO:0001957 GO:0010812 GO:0001649 GO:0090263 GO:0030335 GO:0010718 GO:0045893 GO:0070208 GO:0034504 GO:0015031 GO:0007605 GO:0043589 GO:0034505 GO:0007601 | |
InterPro | IPR008160 IPR000885 IPR001007 | |
Pfam | PF01410 PF01391 PF00093 | |
ProDom | PD002078 | |
SMART | SM00038 SM00214 | |
PROSITE | PS51461 PS01208 PS50184 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0032302 |
MutSbeta complex |
PMID:P02453 |
ECO:0000255 |
C |
Fig 5 shows PCR products after the protein was affected by the mutated allele |
Missing: with/from | ||||
involved_in |
GO:0043588 |
skin development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88467 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0038063 |
collagen-activated tyrosine kinase receptor signaling pathway |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002771192 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0031012 |
extracellular matrix |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88445 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030198 |
extracellular matrix organization |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1095415 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009612 |
response to mechanical stimulus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002771192 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88467 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005615 |
extracellular space |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88452 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005584 |
collagen type I trimer |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88467 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0005201 |
extracellular matrix structural constituent |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104687 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001568 |
blood vessel development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88467 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001503 |
ossification |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002771192 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001501 |
skeletal system development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88467 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090263 |
positive regulation of canonical Wnt signaling pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048706 |
embryonic skeletal system development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0048407 |
platelet-derived growth factor binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043589 |
skin morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0042802 |
identical protein binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034505 |
tooth mineralization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034504 |
protein localization to nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032964 |
collagen biosynthetic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030335 |
positive regulation of cell migration |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030199 |
collagen fibril organization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010718 |
positive regulation of epithelial to mesenchymal transition |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007605 |
sensory perception of sound |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007601 |
visual perception |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005615 |
extracellular space |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005584 |
collagen type I trimer |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0002020 |
protease binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001568 |
blood vessel development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001501 |
skeletal system development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02452 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071260 |
cellular response to mechanical stimulus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071230 |
cellular response to amino acid stimulus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070208 |
protein heterotrimerization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060351 |
cartilage development involved in endochondral bone morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060346 |
bone trabecula formation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060325 |
face morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048705 |
skeletal system morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043588 |
skin development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0031012 |
extracellular matrix |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0015031 |
protein transport |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010812 |
negative regulation of cell-substrate adhesion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005584 |
collagen type I trimer |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005581 |
collagen trimer |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0005201 |
extracellular matrix structural constituent |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001958 |
endochondral ossification |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001957 |
intramembranous ossification |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001649 |
osteoblast differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001568 |
blood vessel development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001501 |
skeletal system development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P11087 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0005201 |
extracellular matrix structural constituent |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005581 |
collagen trimer |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
b
c
- GO:0060351 ! cartilage development involved in endochondral bone morphogenesis
- GO:0071260 ! cellular response to mechanical stimulus
- GO:0071230 ! cellular response to amino acid stimulus
- Cetartiodactyla
- Chordata
- GO:0038063 ! collagen-activated tyrosine kinase receptor signaling pathway
- GO:0032964 ! collagen biosynthetic process
- GO:0030199 ! collagen fibril organization
- GO:0005581 ! collagen trimer
- GO:0005584 ! collagen type I trimer
- Craniata
- GO:0005737 ! cytoplasm
e
- GO:0048706 ! embryonic skeletal system development
- GO:0001958 ! endochondral ossification
- Eukaryota
- Euteleostomi
- Eutheria
- GO:0030198 ! extracellular matrix organization
- GO:0031012 ! extracellular matrix
- GO:0005576 ! extracellular region
- GO:0005615 ! extracellular space
- GO:0005201 ! extracellular matrix structural constituent
p
- Pecora
- GO:0048407 ! platelet-derived growth factor binding
- GO:0010718 ! positive regulation of epithelial to mesenchymal transition
- GO:0030335 ! positive regulation of cell migration
- GO:0090263 ! positive regulation of canonical Wnt signaling pathway
- GO:0045893 ! positive regulation of DNA-templated transcription
- GO:0002020 ! protease binding
- GO:0070208 ! protein heterotrimerization
- GO:0034504 ! protein localization to nucleus
- GO:0015031 ! protein transport
s