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BACSU:YYCF
Contents
Species (Taxon ID) | Bacillus subtilis (strain 168). (224308) | |
Gene Name(s) | yycF | |
Protein Name(s) | Transcriptional regulatory protein YycF | |
External Links | ||
UniProt | P37478 | |
EMBL | D26185 D78193 AL009126 | |
PIR | S65967 | |
RefSeq | NP_391921.1 | |
PDB | 2D1V 2ZWM 3F6P | |
PDBsum | 2D1V 2ZWM 3F6P | |
ProteinModelPortal | P37478 | |
SMR | P37478 | |
STRING | 224308.BSU40410 | |
PaxDb | P37478 | |
EnsemblBacteria | CAB16078 | |
GeneID | 937776 | |
KEGG | bsu:BSU40410 | |
PATRIC | 18980160 | |
GenoList | BSU40410 | |
eggNOG | COG0745 | |
HOGENOM | HOG000034819 | |
InParanoid | P37478 | |
KO | K07668 | |
OMA | ICAFDGI | |
OrthoDB | EOG6G4VQG | |
PhylomeDB | P37478 | |
BioCyc | BSUB:BSU40410-MONOMER | |
EvolutionaryTrace | P37478 | |
Proteomes | UP000001570 | |
GO | GO:0005737 GO:0003677 GO:0000160 GO:0006355 GO:0006351 | |
Gene3D | 1.10.10.10 | |
InterPro | IPR011006 IPR001867 IPR016032 IPR001789 IPR011991 | |
Pfam | PF00072 PF00486 | |
SMART | SM00448 SM00862 | |
SUPFAM | SSF46894 SSF52172 | |
PROSITE | PS50110 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10020 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10020 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000156 |
phosphorelay response regulator activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10061 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
GO:0006355 |
regulation of transcription, DNA-dependent |
ECO:0000315 |
P |
Figure 6 shows direct relationship between Yycf and the expression of P1 promoter of ftszAZ operon |
complete | |||||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Fukuchi, K et al. (2000) The essential two-component regulatory system encoded by yycF and yycG modulates expression of the ftsAZ operon in Bacillus subtilis. Microbiology (Reading, Engl.) 146 ( Pt 7) 1573-83 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page