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BACSU:YYCF

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Species (Taxon ID) Bacillus subtilis (strain 168). (224308)
Gene Name(s) yycF
Protein Name(s) Transcriptional regulatory protein YycF
External Links
UniProt P37478
EMBL D26185
D78193
AL009126
PIR S65967
RefSeq NP_391921.1
PDB 2D1V
2ZWM
3F6P
PDBsum 2D1V
2ZWM
3F6P
ProteinModelPortal P37478
SMR P37478
STRING 224308.BSU40410
PaxDb P37478
EnsemblBacteria CAB16078
GeneID 937776
KEGG bsu:BSU40410
PATRIC 18980160
GenoList BSU40410
eggNOG COG0745
HOGENOM HOG000034819
InParanoid P37478
KO K07668
OMA ICAFDGI
OrthoDB EOG6G4VQG
PhylomeDB P37478
BioCyc BSUB:BSU40410-MONOMER
EvolutionaryTrace P37478
Proteomes UP000001570
GO GO:0005737
GO:0003677
GO:0000160
GO:0006355
GO:0006351
Gene3D 1.10.10.10
InterPro IPR011006
IPR001867
IPR016032
IPR001789
IPR011991
Pfam PF00072
PF00486
SMART SM00448
SM00862
SUPFAM SSF46894
SSF52172
PROSITE PS50110

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0006355

regulation of transcription, DNA-templated

PMID:10878122[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10020
EcoGene:EG10061
EcoGene:EG10731
EcoGene:EG11618
PANTHER:PTN000724188
UniProtKB:P9WGM1

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10020
EcoGene:EG10061
EcoGene:EG14045
PANTHER:PTN000724188

F

Seeded From UniProt

complete

enables

GO:0000156

phosphorelay response regulator activity

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10061
EcoGene:EG10672
EcoGene:EG11615
EcoGene:EG12615
PANTHER:PTN000724188
UniProtKB:O07776
UniProtKB:P37478
UniProtKB:Q9I2U3

F

Seeded From UniProt

complete

involved_in

GO:0000160

phosphorelay signal transduction system

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001789
InterPro:IPR001867

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001867
InterPro:IPR016032

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001867
InterPro:IPR016032

P

Seeded From UniProt

complete

involved_in

GO:0000160

phosphorelay signal transduction system

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0902

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

GO:0006355

regulation of transcription, DNA-dependent

PMID:10878122[1]

ECO:0000315

P

Figure 6 shows direct relationship between Yycf and the expression of P1 promoter of ftszAZ operon

complete
CACAO 2016

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Fukuchi, K et al. (2000) The essential two-component regulatory system encoded by yycF and yycG modulates expression of the ftsAZ operon in Bacillus subtilis. Microbiology (Reading, Engl.) 146 ( Pt 7) 1573-83 PubMed GONUTS page
  2. 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page