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BACSU:XLYA
Contents
Species (Taxon ID) | Bacillus subtilis (strain 168). (224308) | |
Gene Name(s) | xlyA | |
Protein Name(s) | N-acetylmuramoyl-L-alanine amidase XlyA
Autolysin Cell wall hydrolase | |
External Links | ||
UniProt | P39800 | |
EMBL | Z36941 L25924 Z70177 AL009126 AJ002571 | |
PIR | I39938 | |
RefSeq | NP_389164.1 WP_003245230.1 | |
PDB | 3HMB 3RDR | |
PDBsum | 3HMB 3RDR | |
ProteinModelPortal | P39800 | |
SMR | P39800 | |
STRING | 224308.Bsubs1_010100007101 | |
PaxDb | P39800 | |
EnsemblBacteria | CAB13138 | |
GeneID | 939869 | |
KEGG | bsu:BSU12810 | |
PATRIC | 18974313 | |
eggNOG | ENOG4108VPC COG1388 COG3409 COG5632 | |
HOGENOM | HOG000273688 | |
InParanoid | P39800 | |
KO | K01447 | |
OMA | IYGPATK | |
PhylomeDB | P39800 | |
BioCyc | BSUB:BSU12810-MONOMER | |
Proteomes | UP000001570 | |
GO | GO:0005576 GO:0008745 GO:0071555 GO:0030420 GO:0009253 GO:0030435 | |
CDD | cd00118 cd06583 | |
Gene3D | 1.10.101.10 3.10.350.10 3.40.80.10 | |
InterPro | IPR002502 IPR018392 IPR002477 | |
Pfam | PF01510 PF01476 PF01471 | |
SMART | SM00644 SM00257 | |
SUPFAM | SSF47090 SSF54106 SSF55846 | |
PROSITE | PS51782 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
Contributes to |
GO:0019835 |
cytolysis |
ECO:0000250 |
|
P |
In Figure 2, the structures and desirable behaviors were compared between PlyL and XlyA, concluding them to be homologous amidase lysins. Specifically in Panel A of Figure 2, the lysing abilities of the strains were compared on their effect on host cell B. Subtilis. The full-length protein of XlyA was similar to its lysing abilities of the catalytic domain of PlyL, which is responsible for producing amidase, an enzyme that cleaves peptidoglycan in the cell walls of the bacterial host cells. |
complete | |||
involved_in |
GO:0009254 |
peptidoglycan turnover |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10041 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009253 |
peptidoglycan catabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13687 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008745 |
N-acetylmuramoyl-L-alanine amidase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13687 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0008745 |
N-acetylmuramoyl-L-alanine amidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009253 |
peptidoglycan catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008745 |
N-acetylmuramoyl-L-alanine amidase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030435 |
sporulation resulting in formation of a cellular spore |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030420 |
establishment of competence for transformation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071555 |
cell wall organization |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Low, LY et al. (2011) Role of net charge on catalytic domain and influence of cell wall binding domain on bactericidal activity, specificity, and host range of phage lysins. J. Biol. Chem. 286 34391-403 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page