GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
BACSU:RIBC
Contents
| Species (Taxon ID) | Bacillus subtilis (strain 168). (224308) | |
| Gene Name(s) | ribC | |
| Protein Name(s) | Riboflavin biosynthesis protein RibC
Riboflavin kinase Flavokinase FMN adenylyltransferase FAD pyrophosphorylase FAD synthase | |
| External Links | ||
| UniProt | P54575 | |
| EMBL | X95312 Z80835 AL009126 | |
| PIR | D69692 | |
| RefSeq | NP_389549.1 | |
| ProteinModelPortal | P54575 | |
| SMR | P54575 | |
| STRING | 224308.BSU16670 | |
| PaxDb | P54575 | |
| DNASU | 938110 | |
| EnsemblBacteria | CAB13540 | |
| GeneID | 938110 | |
| KEGG | bsu:BSU16670 | |
| PATRIC | 18975141 | |
| GenoList | BSU16670 | |
| eggNOG | COG0196 | |
| HOGENOM | HOG000006844 | |
| InParanoid | P54575 | |
| KO | K11753 | |
| OMA | PEKRYEK | |
| OrthoDB | EOG6QP0ZV | |
| PhylomeDB | P54575 | |
| BioCyc | BSUB:BSU16670-MONOMER MetaCyc:MONOMER-14605 | |
| UniPathway | UPA00276 UPA00277 | |
| Proteomes | UP000001570 | |
| GO | GO:0005524 GO:0003919 GO:0008531 GO:0006747 GO:0009398 GO:0009231 | |
| Gene3D | 2.40.30.30 3.40.50.620 | |
| InterPro | IPR004821 IPR015864 IPR023468 IPR002606 IPR015865 IPR023465 IPR014729 | |
| PANTHER | PTHR22749 | |
| Pfam | PF06574 PF01687 | |
| PIRSF | PIRSF004491 | |
| SMART | SM00904 | |
| SUPFAM | SSF82114 | |
| TIGRFAMs | TIGR00125 TIGR00083 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0009231 |
riboflavin biosynthetic process |
ECO:0000315 |
P |
FIG. 4 shows growth of mutant strain B. subtilis with over expression of ribC compared to wild type strains |
complete | |||||
|
involved_in |
GO:0009398 |
FMN biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000507877 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008531 |
riboflavin kinase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11079 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003919 |
FMN adenylyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008531 |
riboflavin kinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009058 |
biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009231 |
riboflavin biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR002606 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003919 |
FMN adenylyltransferase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008531 |
riboflavin kinase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016779 |
nucleotidyltransferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008152 |
metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016301 |
kinase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016310 |
phosphorylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006747 |
FAD biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00277 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009398 |
FMN biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00276 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Mack, M et al. (1998) Regulation of riboflavin biosynthesis in Bacillus subtilis is affected by the activity of the flavokinase/flavin adenine dinucleotide synthetase encoded by ribC. J. Bacteriol. 180 950-5 PubMed GONUTS page
- ↑ 2.0 2.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
