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BACSU:OPUD
Contents
Species (Taxon ID) | Bacillus subtilis (strain 168). (224308) | |
Gene Name(s) | opuD (synonyms: ytfQ) | |
Protein Name(s) | Glycine betaine transporter OpuD | |
External Links | ||
UniProt | P54417 | |
EMBL | U50082 AF008220 AL009126 | |
PIR | G69670 | |
RefSeq | NP_390885.1 WP_003229220.1 | |
ProteinModelPortal | P54417 | |
SMR | P54417 | |
STRING | 224308.BSU30070 | |
TCDB | 2.A.15.1.1 | |
PaxDb | P54417 | |
EnsemblBacteria | CAB14985 | |
GeneID | 937986 | |
KEGG | bsu:BSU30070 | |
PATRIC | 18977918 | |
GenoList | BSU30070 | |
eggNOG | COG1292 | |
HOGENOM | HOG000053240 | |
InParanoid | P54417 | |
KO | K05020 | |
OMA | DDWLKIN | |
OrthoDB | EOG6D8B89 | |
PhylomeDB | P54417 | |
BioCyc | BSUB:BSU30070-MONOMER | |
Proteomes | UP000001570 | |
GO | GO:0016021 GO:0005886 GO:0005215 GO:0031460 | |
InterPro | IPR018093 IPR000060 | |
Pfam | PF02028 | |
TIGRFAMs | TIGR00842 | |
PROSITE | PS01303 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0031460 |
glycine betaine transport |
ECO:0000315 |
P |
Fig 5: Exponentially growing cells of strain RMKB8 (opuA opuC opuD+) were subjected to a sudden osmotic upshock by adding NaCl to the SMM growth medium to a final concentration of 0.4 M NaCl. There was an immediate stimulation of the rate of glycine betaine uptake after the osmotic upshock, and the rate of glycine betaine transport continued to rise over a period of 90 min. |
complete | |||||
involved_in |
GO:0031460 |
glycine betaine transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10112 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0055085 |
transmembrane transport |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0022857 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0016020 |
membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0022857 |
transmembrane transporter activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071705 |
nitrogen compound transport |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Kappes, RM et al. (1996) Three transport systems for the osmoprotectant glycine betaine operate in Bacillus subtilis: characterization of OpuD. J. Bacteriol. 178 5071-9 PubMed GONUTS page
- ↑ Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page