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BACSU:FNR

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Species (Taxon ID) Bacillus subtilis (strain 168). (224308)
Gene Name(s) fnr
Protein Name(s) Anaerobic regulatory protein
External Links
UniProt P46908
EMBL Z49884
AL009126
PIR S60081
RefSeq NP_391612.1
ProteinModelPortal P46908
SMR P46908
STRING 224308.BSU37310
PaxDb P46908
EnsemblBacteria CAB15759
GeneID 937050
KEGG bsu:BSU37310
PATRIC 18979500
GenoList BSU37310
eggNOG COG0664
HOGENOM HOG000088909
InParanoid P46908
KO K01420
OMA GVEMFAG
OrthoDB EOG6R87DH
PhylomeDB P46908
BioCyc BSUB:BSU37310-MONOMER
Proteomes UP000001570
GO GO:0005737
GO:0051539
GO:0003677
GO:0046872
GO:0003700
GO:0006351
Gene3D 1.10.10.10
2.60.120.10
InterPro IPR018490
IPR000595
IPR012318
IPR014710
IPR001808
IPR018335
IPR011991
Pfam PF00027
PF00325
SMART SM00100
SM00419
SUPFAM SSF51206
PROSITE PS50042
PS00042
PS51063

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005829

cytosol

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10164
EcoGene:EG10325
PANTHER:PTN000705815

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10325
PANTHER:PTN000705815
UniProtKB:P22260
UniProtKB:P46148
UniProtKB:P9WMH3

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR012318

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR018335

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR012318
InterPro:IPR018335

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

GO:0008940

nitrate reductase activity

PMID:8846791[2]

ECO:0000315

F

Table II. Anaerobic fnr mutant and wild-type strains grew at similar rates, but wild-type strain growth increased with nitrate+fumarate, while mutant growth showed no change.

complete

enables

GO:0051536

iron-sulfur cluster binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0411

F

Seeded From UniProt

complete

GO:0071454

cellular response to anoxia

PMID:8846791[2]

ECO:0000270

P

Table IV. Beta-Galactosidase expression by fnr-lacZ fusion showed fnr gene expression is stimulated by anaerobiosis.

complete

enables

GO:0051539

4 iron, 4 sulfur cluster binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0004

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  2. 2.0 2.1 Cruz Ramos, H et al. (1995) Anaerobic transcription activation in Bacillus subtilis: identification of distinct FNR-dependent and -independent regulatory mechanisms. EMBO J. 14 5984-94 PubMed GONUTS page