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BACSU:FNR
Contents
Species (Taxon ID) | Bacillus subtilis (strain 168). (224308) | |
Gene Name(s) | fnr | |
Protein Name(s) | Anaerobic regulatory protein | |
External Links | ||
UniProt | P46908 | |
EMBL | Z49884 AL009126 | |
PIR | S60081 | |
RefSeq | NP_391612.1 | |
ProteinModelPortal | P46908 | |
SMR | P46908 | |
STRING | 224308.BSU37310 | |
PaxDb | P46908 | |
EnsemblBacteria | CAB15759 | |
GeneID | 937050 | |
KEGG | bsu:BSU37310 | |
PATRIC | 18979500 | |
GenoList | BSU37310 | |
eggNOG | COG0664 | |
HOGENOM | HOG000088909 | |
InParanoid | P46908 | |
KO | K01420 | |
OMA | GVEMFAG | |
OrthoDB | EOG6R87DH | |
PhylomeDB | P46908 | |
BioCyc | BSUB:BSU37310-MONOMER | |
Proteomes | UP000001570 | |
GO | GO:0005737 GO:0051539 GO:0003677 GO:0046872 GO:0003700 GO:0006351 | |
Gene3D | 1.10.10.10 2.60.120.10 | |
InterPro | IPR018490 IPR000595 IPR012318 IPR014710 IPR001808 IPR018335 IPR011991 | |
Pfam | PF00027 PF00325 | |
SMART | SM00100 SM00419 | |
SUPFAM | SSF51206 | |
PROSITE | PS50042 PS00042 PS51063 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10164 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10325 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
GO:0008940 |
nitrate reductase activity |
ECO:0000315 |
F |
Table II. Anaerobic fnr mutant and wild-type strains grew at similar rates, but wild-type strain growth increased with nitrate+fumarate, while mutant growth showed no change. |
complete | |||||
enables |
GO:0051536 |
iron-sulfur cluster binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
GO:0071454 |
cellular response to anoxia |
ECO:0000270 |
P |
Table IV. Beta-Galactosidase expression by fnr-lacZ fusion showed fnr gene expression is stimulated by anaerobiosis. |
complete | |||||
enables |
GO:0051539 |
4 iron, 4 sulfur cluster binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 2.0 2.1 Cruz Ramos, H et al. (1995) Anaerobic transcription activation in Bacillus subtilis: identification of distinct FNR-dependent and -independent regulatory mechanisms. EMBO J. 14 5984-94 PubMed GONUTS page