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BACHD:Q9KFY3
Contents
| Species (Taxon ID) | Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM9153 / C-125). (272558) | |
| Gene Name(s) | No Information Provided. | |
| Protein Name(s) | BH0337 protein (ECO:0000313 with EMBL:BAB04056.1) | |
| External Links | ||
| UniProt | Q9KFY3 | |
| EMBL | BA000004 | |
| PIR | A83692 | |
| RefSeq | NP_241203.1 WP_010896518.1 | |
| PDB | 4F3M | |
| PDBsum | 4F3M | |
| ProteinModelPortal | Q9KFY3 | |
| DIP | DIP-59860N | |
| STRING | 272558.BH0337 | |
| EnsemblBacteria | BAB04056 | |
| GeneID | 892113 | |
| KEGG | bha:BH0337 | |
| PATRIC | 18937592 | |
| OMA | SIYWKPT | |
| OrthoDB | EOG68M4GS | |
| BioCyc | BHAL272558:GJC5-375-MONOMER | |
| Proteomes | UP000001258 | |
| InterPro | IPR021124 IPR013422 IPR010155 | |
| Pfam | PF09704 | |
| PIRSF | PIRSF029950 | |
| TIGRFAMs | TIGR01876 TIGR02593 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0043571 |
maintenance of CRISPR repeat elements |
ECO:0000314 |
P |
Figure 1C shows that Cas5d (BH0337 protein) processes pre-crRNA in vitro. |
complete | |||||
| GO:0004521 |
endoribonuclease activity |
ECO:0000314 |
F |
Figure 1D shows that cas5d (BH0337 protein) has endoribonuclease activity because it can cleave RNA. |
complete | |||||
| GO:0004518 |
nuclease activity |
ECO:0000314 |
F |
Figure 1 shows that cas5d (BH0337 protein) has DNase activity on linear dsDNA, circular dsDNA, and ssDNA. |
complete | |||||
|
enables |
GO:0004518 |
nuclease activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004521 |
endoribonuclease activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0043571 |
maintenance of CRISPR repeat elements |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004519 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0004518 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0090502 |
RNA phosphodiester bond hydrolysis, endonucleolytic |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0004521 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004519 |
endonuclease activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0043571 |
maintenance of CRISPR repeat elements |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0051607 |
defense response to virus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Nam, KH et al. (2012) Cas5d protein processes pre-crRNA and assembles into a cascade-like interference complex in subtype I-C/Dvulg CRISPR-Cas system. Structure 20 1574-84 PubMed GONUTS page
- ↑ 2.0 2.1 Punetha, A et al. (2014) Active site plasticity enables metal-dependent tuning of Cas5d nuclease activity in CRISPR-Cas type I-C system. Nucleic Acids Res. 42 3846-56 PubMed GONUTS page
