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ARATH:RHM2
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | RHM2 (ECO:0000303 with PMID:15134748[1]) (synonyms: MUM4 (ECO:0000303 with PMID:14701918[2])) | |
| Protein Name(s) | Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 (ECO:0000305 with PMID:17190829[3])
NDP-rhamnose synthase Protein MUCILAGE-MODIFIED 4 Protein RHAMNOSE BIOSYNTHESIS 2 Rhamnose biosynthetic enzyme 2 AtRHM2 UDP-L-rhamnose synthase MUM4 UDP-glucose 4,6-dehydratase (ECO:0000303 with PMID:17190829[3]) UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose 4-keto-reductase (ECO:0000303 with PMID:17190829[3]) | |
| External Links | ||
| UniProt | Q9LPG6 | |
| EMBL | AJ565874 AY328518 AC018748 AC024260 CP002684 | |
| PIR | B96575 | |
| RefSeq | NP_564633.2 | |
| UniGene | At.20215 | |
| ProteinModelPortal | Q9LPG6 | |
| SMR | Q9LPG6 | |
| BioGrid | 27010 | |
| MINT | MINT-8067929 | |
| PaxDb | Q9LPG6 | |
| PRIDE | Q9LPG6 | |
| EnsemblPlants | AT1G53500.1 | |
| GeneID | 841785 | |
| KEGG | ath:AT1G53500 | |
| TAIR | AT1G53500 | |
| eggNOG | COG1088 | |
| HOGENOM | HOG000167988 | |
| InParanoid | Q9LPG6 | |
| KO | K12450 | |
| OMA | ESSIQFV | |
| PhylomeDB | Q9LPG6 | |
| BioCyc | MetaCyc:AT1G53500-MONOMER | |
| Proteomes | UP000006548 | |
| ExpressionAtlas | Q9LPG6 | |
| Genevestigator | Q9LPG6 | |
| GO | GO:0005829 GO:0050662 GO:0008831 GO:0008460 GO:0010489 GO:0010490 GO:0050377 GO:0010280 GO:0045226 GO:0010192 GO:0010214 GO:0010253 | |
| Gene3D | 3.40.50.720 | |
| InterPro | IPR005888 IPR001509 IPR016040 IPR029903 | |
| PANTHER | PTHR10366:SF41 | |
| Pfam | PF01370 PF04321 | |
| TIGRFAMs | TIGR01181 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0050377 |
UDP-glucose 4,6-dehydratase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0010280 |
UDP-L-rhamnose synthase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0010280 |
UDP-L-rhamnose synthase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
Missing: with/from | |||
|
involved_in |
GO:0010253 |
UDP-rhamnose biosynthetic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010214 |
seed coat development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010192 |
mucilage biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008460 |
dTDP-glucose 4,6-dehydratase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009225 |
nucleotide-sugar metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0050377 |
UDP-glucose 4,6-dehydratase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0010490 |
UDP-4-keto-rhamnose-4-keto-reductase activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0010489 |
UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016829 |
lyase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016491 |
oxidoreductase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016853 |
isomerase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008152 |
metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Seifert, GJ (2004) Nucleotide sugar interconversions and cell wall biosynthesis: how to bring the inside to the outside. Curr. Opin. Plant Biol. 7 277-84 PubMed GONUTS page
- ↑ 2.0 2.1 Western, TL et al. (2004) MUCILAGE-MODIFIED4 encodes a putative pectin biosynthetic enzyme developmentally regulated by APETALA2, TRANSPARENT TESTA GLABRA1, and GLABRA2 in the Arabidopsis seed coat. Plant Physiol. 134 296-306 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 Oka, T et al. (2007) Functional analysis of Arabidopsis thaliana RHM2/MUM4, a multidomain protein involved in UDP-D-glucose to UDP-L-rhamnose conversion. J. Biol. Chem. 282 5389-403 PubMed GONUTS page
- ↑ Usadel, B et al. (2004) RHM2 is involved in mucilage pectin synthesis and is required for the development of the seed coat in Arabidopsis. Plant Physiol. 134 286-95 PubMed GONUTS page
- ↑ Western, TL et al. (2001) Isolation and characterization of mutants defective in seed coat mucilage secretory cell development in Arabidopsis. Plant Physiol. 127 998-1011 PubMed GONUTS page
- ↑ Ito, J et al. (2011) Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J. Proteome Res. 10 1571-82 PubMed GONUTS page
