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ARATH:PP199
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | EMB2654 | |
| Protein Name(s) | Pentatricopeptide repeat-containing protein At2g41720
Protein EMBRYO DEFECTIVE 2654 | |
| External Links | ||
| UniProt | Q8RWS8 | |
| EMBL | AC002339 CP002685 AY091135 AY117242 | |
| PIR | C84845 | |
| RefSeq | NP_850356.1 | |
| UniGene | At.43624 | |
| ProteinModelPortal | Q8RWS8 | |
| SMR | Q8RWS8 | |
| BioGrid | 4108 | |
| IntAct | Q8RWS8 | |
| STRING | 3702.AT2G41720.1 | |
| iPTMnet | Q8RWS8 | |
| PaxDb | Q8RWS8 | |
| EnsemblPlants | AT2G41720.1 | |
| GeneID | 818771 | |
| Gramene | AT2G41720.1 | |
| KEGG | ath:AT2G41720 | |
| Araport | AT2G41720 | |
| TAIR | locus:2054331 | |
| eggNOG | KOG4197 ENOG410Z7Z7 | |
| HOGENOM | HOG000030732 | |
| InParanoid | Q8RWS8 | |
| OMA | WRKYIEV | |
| OrthoDB | EOG0936039P | |
| PhylomeDB | Q8RWS8 | |
| PRO | PR:Q8RWS8 | |
| Proteomes | UP000006548 | |
| ExpressionAtlas | Q8RWS8 | |
| Genevisible | Q8RWS8 | |
| GO | GO:0043231 GO:0004519 GO:0003723 GO:0009451 | |
| InterPro | IPR002885 IPR011990 | |
| Pfam | PF01535 PF13041 PF13812 | |
| SUPFAM | SSF48452 | |
| TIGRFAMs | TIGR00756 | |
| PROSITE | PS51375 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0010239 |
chloroplast mRNA processing |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009793 |
embryo development ending in seed dormancy |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008380 |
RNA splicing |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003735 |
structural constituent of ribosome |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002512869 |
C |
Seeded From UniProt |
complete | ||
| GO:0008380 |
RNA splicing |
ECO:0000314 |
P |
Provides trans-splicing, also involved in RNA adherence. |
complete | |||||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 Aryamanesh, N et al. (2017) The Pentatricopeptide Repeat Protein EMB2654 Is Essential for Trans-Splicing of a Chloroplast Small Ribosomal Subunit Transcript. Plant Physiol. 173 1164-1176 PubMed GONUTS page
- ↑ Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
