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ARATH:PATL1
Contents
Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
Gene Name(s) | PATL1 | |
Protein Name(s) | Patellin-1 | |
External Links | ||
UniProt | Q56WK6 | |
EMBL | AC067754 CP002684 AY045913 AY113865 AK222034 | |
PIR | H96744 | |
RefSeq | NP_177360.1 | |
UniGene | At.43384 | |
ProteinModelPortal | Q56WK6 | |
SMR | Q56WK6 | |
BioGrid | 28766 | |
IntAct | Q56WK6 | |
STRING | 3702.AT1G72150.1-P | |
PaxDb | Q56WK6 | |
PRIDE | Q56WK6 | |
EnsemblPlants | AT1G72150.1 | |
GeneID | 843546 | |
KEGG | ath:AT1G72150 | |
TAIR | AT1G72150 | |
eggNOG | NOG270325 | |
HOGENOM | HOG000238518 | |
InParanoid | Q56WK6 | |
OMA | ASEACTL | |
PhylomeDB | Q56WK6 | |
Proteomes | UP000006548 | |
ExpressionAtlas | Q56WK6 | |
Genevestigator | Q56WK6 | |
GO | GO:0048046 GO:0009507 GO:0005794 GO:0016021 GO:0016020 GO:0005886 GO:0009506 GO:0005773 GO:0008289 GO:0002020 GO:0007049 GO:0051301 GO:0009860 GO:0006810 | |
Gene3D | 3.40.525.10 | |
InterPro | IPR001251 IPR011074 IPR009038 | |
Pfam | PF00650 PF03765 | |
SMART | SM01100 SM00516 | |
SUPFAM | SSF101576 SSF46938 SSF52087 | |
PROSITE | PS50191 PS50866 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
enables |
GO:0002020 |
protease binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0048046 |
apoplast |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009860 |
pollen tube growth |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0009507 |
chloroplast |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0009506 |
plasmodesma |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
NOT|part_of |
GO:0005829 |
cytosol |
ECO:0000245 |
automatically integrated combinatorial evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005773 |
vacuole |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0008289 |
lipid binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051301 |
cell division |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007049 |
cell cycle |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Isono, E et al. (2010) The deubiquitinating enzyme AMSH3 is required for intracellular trafficking and vacuole biogenesis in Arabidopsis thaliana. Plant Cell 22 1826-37 PubMed GONUTS page
- ↑ Bindschedler, LV et al. (2008) Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. Phytochemistry 69 1962-72 PubMed GONUTS page
- ↑ Mitra, SK et al. (2007) Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. J. Proteome Res. 6 1933-50 PubMed GONUTS page
- ↑ Qin, Y et al. (2009) Penetration of the stigma and style elicits a novel transcriptome in pollen tubes, pointing to genes critical for growth in a pistil. PLoS Genet. 5 e1000621 PubMed GONUTS page
- ↑ Kleffmann, T et al. (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr. Biol. 14 354-62 PubMed GONUTS page
- ↑ Fernandez-Calvino, L et al. (2011) Arabidopsis plasmodesmal proteome. PLoS ONE 6 e18880 PubMed GONUTS page
- ↑ Nikolovski, N et al. (2012) Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Plant Physiol. 160 1037-51 PubMed GONUTS page
- ↑ Marmagne, A et al. (2007) A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Mol. Cell Proteomics 6 1980-96 PubMed GONUTS page
- ↑ Benschop, JJ et al. (2007) Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. Mol. Cell Proteomics 6 1198-214 PubMed GONUTS page
- ↑ Ito, J et al. (2011) Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J. Proteome Res. 10 1571-82 PubMed GONUTS page
- ↑ Parsons, HT et al. (2012) Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Plant Physiol. 159 12-26 PubMed GONUTS page
- ↑ Szponarski, W et al. (2004) Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. Proteomics 4 397-406 PubMed GONUTS page