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ARATH:PATL1

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Species (Taxon ID) Arabidopsis thaliana (Mouse-ear cress). (3702)
Gene Name(s) PATL1
Protein Name(s) Patellin-1
External Links
UniProt Q56WK6
EMBL AC067754
CP002684
AY045913
AY113865
AK222034
PIR H96744
RefSeq NP_177360.1
UniGene At.43384
ProteinModelPortal Q56WK6
SMR Q56WK6
BioGrid 28766
IntAct Q56WK6
STRING 3702.AT1G72150.1-P
PaxDb Q56WK6
PRIDE Q56WK6
EnsemblPlants AT1G72150.1
GeneID 843546
KEGG ath:AT1G72150
TAIR AT1G72150
eggNOG NOG270325
HOGENOM HOG000238518
InParanoid Q56WK6
OMA ASEACTL
PhylomeDB Q56WK6
Proteomes UP000006548
ExpressionAtlas Q56WK6
Genevestigator Q56WK6
GO GO:0048046
GO:0009507
GO:0005794
GO:0016021
GO:0016020
GO:0005886
GO:0009506
GO:0005773
GO:0008289
GO:0002020
GO:0007049
GO:0051301
GO:0009860
GO:0006810
Gene3D 3.40.525.10
InterPro IPR001251
IPR011074
IPR009038
Pfam PF00650
PF03765
SMART SM01100
SM00516
SUPFAM SSF101576
SSF46938
SSF52087
PROSITE PS50191
PS50866

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0002020

protease binding

PMID:20543027[1]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q5PNU3

F

Seeded From UniProt

complete

part_of

GO:0048046

apoplast

PMID:18538804[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

PMID:17432890[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0009860

pollen tube growth

PMID:19714218[4]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0009507

chloroplast

PMID:15028209[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0009506

plasmodesma

PMID:21533090[6]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:22923678[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:17644812[8]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:17317660[9]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

NOT|part_of

GO:0005829

cytosol

PMID:21166475[10]

ECO:0000245

automatically integrated combinatorial evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

PMID:22430844[11]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005773

vacuole

PMID:14760709[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0008289

lipid binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0446

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

involved_in

GO:0051301

cell division

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0132

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472
UniProtKB-SubCell:SL-0162

C

Seeded From UniProt

complete

involved_in

GO:0007049

cell cycle

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0131

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Isono, E et al. (2010) The deubiquitinating enzyme AMSH3 is required for intracellular trafficking and vacuole biogenesis in Arabidopsis thaliana. Plant Cell 22 1826-37 PubMed GONUTS page
  2. Bindschedler, LV et al. (2008) Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. Phytochemistry 69 1962-72 PubMed GONUTS page
  3. Mitra, SK et al. (2007) Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. J. Proteome Res. 6 1933-50 PubMed GONUTS page
  4. Qin, Y et al. (2009) Penetration of the stigma and style elicits a novel transcriptome in pollen tubes, pointing to genes critical for growth in a pistil. PLoS Genet. 5 e1000621 PubMed GONUTS page
  5. Kleffmann, T et al. (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr. Biol. 14 354-62 PubMed GONUTS page
  6. Fernandez-Calvino, L et al. (2011) Arabidopsis plasmodesmal proteome. PLoS ONE 6 e18880 PubMed GONUTS page
  7. Nikolovski, N et al. (2012) Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Plant Physiol. 160 1037-51 PubMed GONUTS page
  8. Marmagne, A et al. (2007) A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Mol. Cell Proteomics 6 1980-96 PubMed GONUTS page
  9. Benschop, JJ et al. (2007) Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. Mol. Cell Proteomics 6 1198-214 PubMed GONUTS page
  10. Ito, J et al. (2011) Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J. Proteome Res. 10 1571-82 PubMed GONUTS page
  11. Parsons, HT et al. (2012) Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Plant Physiol. 159 12-26 PubMed GONUTS page
  12. Szponarski, W et al. (2004) Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. Proteomics 4 397-406 PubMed GONUTS page