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ARATH:ICS1
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | ICS1 | |
| Protein Name(s) | Isochorismate synthase 1, chloroplastic
AtIcs1 IcsI Enhanced disease susceptibility 16 Eds16 Isochorismate mutase 1 Salicylic acid induction deficient 2 Sid2 menF-like protein 1 | |
| External Links | ||
| UniProt | Q9S7H8 | |
| EMBL | AF078080 AY056055 AC008263 AC011765 CP002684 CP002684 AF367342 AY124864 | |
| PIR | D96776 T51711 | |
| RefSeq | NP_565090.1 NP_974143.1 | |
| UniGene | At.22628 | |
| ProteinModelPortal | Q9S7H8 | |
| SMR | Q9S7H8 | |
| PaxDb | Q9S7H8 | |
| PRIDE | Q9S7H8 | |
| EnsemblPlants | AT1G74710.1 | |
| GeneID | 843810 | |
| KEGG | ath:AT1G74710 | |
| TAIR | AT1G74710 | |
| eggNOG | COG1169 | |
| HOGENOM | HOG000006336 | |
| InParanoid | Q9S7H8 | |
| KO | K02552 | |
| OMA | DMEIERD | |
| PhylomeDB | Q9S7H8 | |
| BioCyc | ARA:GQT-708-MONOMER MetaCyc:AT1G74710-MONOMER | |
| BRENDA | 5.4.4.2 | |
| SABIO-RK | Q9S7H8 | |
| UniPathway | UPA00025 | |
| Proteomes | UP000006548 | |
| ExpressionAtlas | Q9S7H8 | |
| Genevestigator | Q9S7H8 | |
| GO | GO:0009507 GO:0009536 GO:0008909 GO:0006952 GO:0042742 GO:0050832 GO:0031348 GO:0042372 GO:0009617 GO:0009409 GO:0009697 GO:0010118 GO:0009627 | |
| Gene3D | 3.60.120.10 | |
| InterPro | IPR005801 IPR015890 IPR004561 | |
| PANTHER | PTHR11236:SF3 | |
| Pfam | PF00425 | |
| SUPFAM | SSF56322 | |
| TIGRFAMs | TIGR00543 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0008909 |
isochorismate synthase activity |
ECO:0000247 |
|
F |
Fig. 2d indicates a clustal alignment of the Arabidpopsis ICS1 region with selected isochorismate synthases. Note the identical regions in black and the conserved regions in gray, as well as the critical regions shared for ICS activity (blue asterisk) |
complete | ||||
|
enables |
GO:0008909 |
isochorismate synthase activity |
ECO:0000247 |
sequence alignment evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0060866 |
leaf abscission |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0050832 |
defense response to fungus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0050829 |
defense response to Gram-negative bacterium |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042742 |
defense response to bacterium |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042372 |
phylloquinone biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042372 |
phylloquinone biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0031348 |
negative regulation of defense response |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010118 |
stomatal movement |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009627 |
systemic acquired resistance |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009617 |
response to bacterium |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009536 |
plastid |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009536 |
plastid |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
Missing: with/from | |||
|
involved_in |
GO:0009409 |
response to cold |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008909 |
isochorismate synthase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042372 |
phylloquinone biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000881689 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0009536 |
plastid |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000881689 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008909 |
isochorismate synthase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG12362 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008909 |
isochorismate synthase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009058 |
biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008909 |
isochorismate synthase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009697 |
salicylic acid biosynthetic process |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008909 |
isochorismate synthase activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016853 |
isomerase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006952 |
defense response |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009536 |
plastid |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009697 |
salicylic acid biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00025 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Wildermuth, MC et al. (2001) Isochorismate synthase is required to synthesize salicylic acid for plant defence. Nature 414 562-5 PubMed GONUTS page
- ↑ 2.0 2.1 Patharkar, OR et al. (2017) Leaf shedding as an anti-bacterial defense in Arabidopsis cauline leaves. PLoS Genet. 13 e1007132 PubMed GONUTS page
- ↑ Adie, BA et al. (2007) ABA is an essential signal for plant resistance to pathogens affecting JA biosynthesis and the activation of defenses in Arabidopsis. Plant Cell 19 1665-81 PubMed GONUTS page
- ↑ 4.0 4.1 Melotto, M et al. (2006) Plant stomata function in innate immunity against bacterial invasion. Cell 126 969-80 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 Garcion, C et al. (2008) Characterization and biological function of the ISOCHORISMATE SYNTHASE2 gene of Arabidopsis. Plant Physiol. 147 1279-87 PubMed GONUTS page
- ↑ Gross, J et al. (2006) A plant locus essential for phylloquinone (vitamin K1) biosynthesis originated from a fusion of four eubacterial genes. J. Biol. Chem. 281 17189-96 PubMed GONUTS page
- ↑ Consonni, C et al. (2006) Conserved requirement for a plant host cell protein in powdery mildew pathogenesis. Nat. Genet. 38 716-20 PubMed GONUTS page
- ↑ Mishina, TE & Zeier, J (2007) Pathogen-associated molecular pattern recognition rather than development of tissue necrosis contributes to bacterial induction of systemic acquired resistance in Arabidopsis. Plant J. 50 500-13 PubMed GONUTS page
- ↑ 9.0 9.1 Prithiviraj, B et al. (2005) Staphylococcus aureus pathogenicity on Arabidopsis thaliana is mediated either by a direct effect of salicylic acid on the pathogen or by SA-dependent, NPR1-independent host responses. Plant J. 42 417-32 PubMed GONUTS page
- ↑ Kim, Y et al. (2013) Roles of CAMTA transcription factors and salicylic acid in configuring the low-temperature transcriptome and freezing tolerance of Arabidopsis. Plant J. 75 364-76 PubMed GONUTS page
- ↑ 11.0 11.1 11.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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