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ARATH:GCSP1
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | GLDP1 (synonyms: GDP1) | |
| Protein Name(s) | Glycine dehydrogenase (decarboxylating) 1, mitochondrial
Glycine cleavage system P protein 1 Glycine decarboxylase 1 Glycine decarboxylase P-protein 1 AtGLDP1 Glycine dehydrogenase (aminomethyl-transferring) 1 | |
| External Links | ||
| UniProt | Q94B78 | |
| EMBL | AL031804 AL161582 CP002687 AY063903 AY091186 AY042800 AY128922 AY065004 BT001132 BT000446 | |
| PIR | T05309 | |
| RefSeq | NP_195027.1 | |
| UniGene | At.22214 At.24550 | |
| ProteinModelPortal | Q94B78 | |
| SMR | Q94B78 | |
| BioGrid | 14723 | |
| IntAct | Q94B78 | |
| MINT | MINT-8070384 | |
| PRIDE | Q94B78 | |
| EnsemblPlants | AT4G33010.1 | |
| GeneID | 829438 | |
| KEGG | ath:AT4G33010 | |
| GeneFarm | 1737 | |
| TAIR | AT4G33010 | |
| HOGENOM | HOG000239369 | |
| InParanoid | Q94B78 | |
| KO | K00281 | |
| OMA | RNAETPH | |
| PhylomeDB | Q94B78 | |
| BioCyc | ARA:AT4G33010-MONOMER ARA:GQT-949-MONOMER | |
| PRO | PR:Q94B78 | |
| Proteomes | UP000006548 | |
| ExpressionAtlas | Q94B78 | |
| Genevestigator | Q94B78 | |
| GO | GO:0048046 GO:0009507 GO:0009941 GO:0009570 GO:0009534 GO:0005739 GO:0004375 GO:0030170 GO:0006546 GO:0046686 | |
| Gene3D | 3.40.640.10 | |
| HAMAP | MF_00711 | |
| InterPro | IPR020580 IPR020581 IPR003437 IPR015424 IPR015421 | |
| PANTHER | PTHR11773 | |
| Pfam | PF02347 | |
| SUPFAM | SSF53383 | |
| TIGRFAMs | TIGR00461 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0048046 |
apoplast |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0046686 |
response to cadmium ion |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009941 |
chloroplast envelope |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009570 |
chloroplast stroma |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009534 |
chloroplast thylakoid |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006546 |
glycine catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0048046 |
apoplast |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000206587 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0030170 |
pyridoxal phosphate binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000206531 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0019464 |
glycine decarboxylation via glycine cleavage system |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000206531 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016594 |
glycine binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000206531 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0009941 |
chloroplast envelope |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000206587 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005960 |
glycine cleavage complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000206531 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000206533 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004375 |
glycine dehydrogenase (decarboxylating) activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11810 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004375 |
glycine dehydrogenase (decarboxylating) activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006544 |
glycine metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006546 |
glycine catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004375 |
glycine dehydrogenase (decarboxylating) activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016491 |
oxidoreductase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Bindschedler, LV et al. (2008) Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. Phytochemistry 69 1962-72 PubMed GONUTS page
- ↑ Semane, B et al. (2010) Leaf proteome responses of Arabidopsis thaliana exposed to mild cadmium stress. J. Plant Physiol. 167 247-54 PubMed GONUTS page
- ↑ Froehlich, JE et al. () Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. J. Proteome Res. 2 413-25 PubMed GONUTS page
- ↑ 4.0 4.1 Ferro, M et al. (2010) AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Mol. Cell Proteomics 9 1063-84 PubMed GONUTS page
- ↑ Zybailov, B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS ONE 3 e1994 PubMed GONUTS page
- ↑ Engel, N et al. (2007) Deletion of glycine decarboxylase in Arabidopsis is lethal under nonphotorespiratory conditions. Plant Physiol. 144 1328-35 PubMed GONUTS page
- ↑ Lee, CP et al. (2008) Heterogeneity of the mitochondrial proteome for photosynthetic and non-photosynthetic Arabidopsis metabolism. Mol. Cell Proteomics 7 1297-316 PubMed GONUTS page
- ↑ Heazlewood, JL et al. (2004) Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Plant Cell 16 241-56 PubMed GONUTS page
- ↑ 9.0 9.1 9.2 9.3 9.4 9.5 9.6 9.7 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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